Sphingobium sp. YBL2: TZ53_20010
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Entry
TZ53_20010 CDS
T03855
Name
(GenBank) phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb00030
Pentose phosphate pathway
syb01100
Metabolic pathways
syb01120
Microbial metabolism in diverse environments
syb01200
Carbon metabolism
Module
syb_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
TZ53_20010
Enzymes [BR:
syb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
TZ53_20010
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Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
AJR25684
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Position
4353158..4354999
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AA seq
613 aa
AA seq
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MTDLHPVIEKVTERIVKRSAASRLKYLSLIERGRDAGTNRAQLSCGNLAHGFAASGEDKA
VIRTGAAMNFGIVTAYNDMLSAHQPYGRYPEQIKLAAREVGCTAQVAGGVPAMCDGVTQG
QAGMDLSLFSRDTIALGTAIALSHAMFEGALLLGICDKIVPGLLIGALRFGHLPTILIPA
GPMPSGLANKEKVRIRQLYAEGKVGREELLESESASYHGAGTCTFYGTANSNQMMMEMMG
LHMPAASFVHPGTRLRQELTRAAVHQLSRIGWDRDGQPNDDYRPLGHCVDEKAIVNAIIG
LMATGGSTNHAIHLPAIARAAGIVVDWTDFAEISDVVPLLARVYPNGSGDVNNFHAAGGI
SYVIRELLGNGLLHGDILTVARQGLADYGKEPVLENDALAWKDVPESRDLSILRPVSDAF
NPDGGMRLLAGNLGRCVMKVSAVDRERWTIEAPAAVFHDQDDVLRAFKAGELERDVVVVV
RFQGPRANGMPELHKLTPALGVLQDRGFRVALVTDGRMSGASGKVPAAIHLSPEALGGGP
IAKLRDGDMVRVCAETGLIEALVDAAEWDGRDTPAPPPAPYDTGRELFALFRHHSDLAES
GASPILAAMETEV
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccttcatccggtgatcgaaaaggtcaccgaacgcatcgtgaagcgcagcgcg
gcttcgcgcctcaaatatctgagcctgatcgagcgcgggcgggacgcgggcaccaaccgc
gcccagctttcatgcgggaacctggcccatggctttgccgcgagcggcgaagacaaggct
gtcatccgcaccggcgcggcaatgaatttcggcatcgtcaccgcctataacgacatgctg
tcggcgcatcagccctatggccgctatcccgagcagatcaagctggcggcgcgggaggtg
ggctgcaccgctcaggtcgcgggcggcgttccggcgatgtgcgacggcgtgacccagggg
caggcgggcatggacctgtcgctcttttcccgcgacaccatcgcgctgggcaccgccatc
gccctgtcccacgccatgttcgagggcgcgctgctgctgggcatctgcgacaagatcgtg
ccggggctgctgatcggggcgctgcgtttcgggcatctgccgaccatattgatccccgcc
gggccgatgccgtccggcctcgccaacaaggaaaaggtgcgcatccgccagctctatgcc
gaaggcaaggtcggccgggaggaactgctggagtccgaaagcgccagctatcacggcgca
gggacctgcaccttctatggcacggccaattcgaaccagatgatgatggagatgatgggg
ctccacatgcccgccgcctccttcgtgcatccgggcacgaggcttcggcaggaactgacg
cgggcggcggtgcatcaattgtcgcgcatcggctgggacagggacggacaacccaatgac
gattatcggccgctggggcattgcgtggatgaaaaggcgatcgtcaacgccatcatcggc
ctgatggcgaccggcggatcgaccaaccatgcgatccatctgccggccatcgcccgggcg
gcggggatcgtcgtcgactggaccgatttcgcggaaatttccgatgtcgtgccgctgctg
gcgcgggtctatcccaatggatcgggcgatgtgaacaatttccatgcggcaggcggcatc
agctatgtgatccgcgaactgctcggcaacgggctgctgcatggcgacatcctcaccgtc
gcgcggcagggactggccgattatggcaaggaaccggtgctggagaatgacgcgctggcc
tggaaggatgtgcccgaatcgcgggacctgtcgatcctccggccggtgtccgacgccttc
aatcccgacggcgggatgcgattgctggccggcaatcttggccgctgcgtcatgaaggtg
agcgcggtcgaccgggagcgctggaccatcgaagcgcccgcggcggtcttccacgatcag
gacgatgtgctgcgcgccttcaaggccggcgaactggagcgcgatgtcgtggtcgtggtg
cggttccagggaccaagggcgaacggcatgcccgaactgcacaagctgaccccggcgctg
ggcgtgttgcaggatcgcggcttccgcgtcgcgctggtgacggacgggcgcatgtccggc
gcatcgggcaaggtgcccgcggcgatccacctgtcgccggaagcgttgggaggcggcccc
atcgccaagctgcgcgacggcgacatggtgcgggtctgcgcggagacgggcctgatcgaa
gcgctggtcgacgcggcggaatgggacggccgcgacacgcccgcgccgccccccgccccc
tatgatacgggccgcgagctgttcgcgctgttccgccatcatagcgatctggcggaaagc
ggcgcatcgcccattctggcggccatggaaaccgaagtttag
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