Sphingobium sp. YBL2: TZ53_20380
Help
Entry
TZ53_20380 CDS
T03855
Name
(GenBank) FecI sigma-24 factor
KO
K24073
RNA polymerase sigma factor CnrH
Organism
syb
Sphingobium sp. YBL2
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syb03021
]
TZ53_20380
Transcription machinery [BR:
syb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TZ53_20380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_28
PhyR_sigma-like
DUF134
Xre-like-HTH
GerE
HTH_Tnp_ISL3
HTH_23
HTH_29
HTH_10
HTH_17
HTH_psq
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AJR25751
UniProt:
A0A0C5XLS9
LinkDB
All DBs
Position
complement(4425936..4426517)
Genome browser
AA seq
193 aa
AA seq
DB search
MSPSLTERGDAELAALALAGQQSAYGELMRRHRDAVFRLARGHAGDATEALDITQETFIS
AFAALGRYDGARPFRLWIARIAVNKCRDWARRRAVRRFFTFARPIEEAGAVADGMPTPEE
AVQSRAELAHIHAAIAALPGNLKDVLVLRAIEGMSQAEAAQILGISEKAVETRLYRARNK
LAEGLRDGATGRV
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
gtgagcccgtcgctcaccgaacgcggcgatgcagagctggccgcgctggcgctcgccggg
cagcagagcgcctatggcgagctgatgcgccgccatcgcgacgccgtgttccgtctggcg
cggggacatgcgggcgatgcgacggaggcgctcgacatcacgcaggagacgttcatctcc
gccttcgccgcgcttggccgctatgatggcgcgcggcccttccggctgtggatcgcgcgg
atcgcggtgaataaatgccgtgactgggcgcggcggcgggcggtgcggcgcttcttcacc
ttcgcccggccgatcgaggaagcaggcgccgtggcggacggcatgccgacgccggaggag
gctgtccagtcccgggcggagctggcgcatatccatgcagccatcgccgcattgcccggc
aatctcaaggacgtgctggttctgcgcgccatcgagggaatgagccaggcggaggcggcg
cagatattgggcatcagcgagaaagccgtcgaaacacgcctctacagggcgcgcaacaaa
ttggccgaaggattgagggatggggcgacgggccgcgtatag
DBGET
integrated database retrieval system