KEGG   Sphingobium sp. YBL2: TZ53_20380
Entry
TZ53_20380        CDS       T03855                                 
Name
(GenBank) FecI sigma-24 factor
  KO
K24073  RNA polymerase sigma factor CnrH
Organism
syb  Sphingobium sp. YBL2
Brite
KEGG Orthology (KO) [BR:syb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:syb03021]
    TZ53_20380
Transcription machinery [BR:syb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     TZ53_20380
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_28 PhyR_sigma-like DUF134 Xre-like-HTH GerE HTH_Tnp_ISL3 HTH_23 HTH_29 HTH_10 HTH_17 HTH_psq HTH_24
Other DBs
NCBI-ProteinID: AJR25751
UniProt: A0A0C5XLS9
LinkDB
Position
complement(4425936..4426517)
AA seq 193 aa
MSPSLTERGDAELAALALAGQQSAYGELMRRHRDAVFRLARGHAGDATEALDITQETFIS
AFAALGRYDGARPFRLWIARIAVNKCRDWARRRAVRRFFTFARPIEEAGAVADGMPTPEE
AVQSRAELAHIHAAIAALPGNLKDVLVLRAIEGMSQAEAAQILGISEKAVETRLYRARNK
LAEGLRDGATGRV
NT seq 582 nt   +upstreamnt  +downstreamnt
gtgagcccgtcgctcaccgaacgcggcgatgcagagctggccgcgctggcgctcgccggg
cagcagagcgcctatggcgagctgatgcgccgccatcgcgacgccgtgttccgtctggcg
cggggacatgcgggcgatgcgacggaggcgctcgacatcacgcaggagacgttcatctcc
gccttcgccgcgcttggccgctatgatggcgcgcggcccttccggctgtggatcgcgcgg
atcgcggtgaataaatgccgtgactgggcgcggcggcgggcggtgcggcgcttcttcacc
ttcgcccggccgatcgaggaagcaggcgccgtggcggacggcatgccgacgccggaggag
gctgtccagtcccgggcggagctggcgcatatccatgcagccatcgccgcattgcccggc
aatctcaaggacgtgctggttctgcgcgccatcgagggaatgagccaggcggaggcggcg
cagatattgggcatcagcgagaaagccgtcgaaacacgcctctacagggcgcgcaacaaa
ttggccgaaggattgagggatggggcgacgggccgcgtatag

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