Sphingobium sp. YBL2: TZ53_20780
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Entry
TZ53_20780 CDS
T03855
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
syb
Sphingobium sp. YBL2
Pathway
syb03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
TZ53_20780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syb03400
]
TZ53_20780
DNA repair and recombination proteins [BR:
syb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
TZ53_20780
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Paralog
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GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AJR25819
UniProt:
A0A0C5X986
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Position
complement(4498811..4499713)
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AA seq
300 aa
AA seq
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MAARAYWQGQIRLALVSIPVEIYAATKSGAQIAFHQIHQPSGKRVRYEKTVPGLGPVDPE
DIVKGYELSKGDYVLLQPDEIDAVKLESKKTLELTQFVDASEIDVLYYERPYYVVPADDL
AEEAFIVLREALRRTKKVGLGQLAMRGREYIVSLKPCGRGMVLETLRYADEVNRAQSYFR
DIEDAKPDAELLDLAETLIEKKTAPFKPDSFHDRYVDALERLIEKKKKSKGRRVIEEEEE
GAAPRGSNVIDLMAALKKSVGSGAASSAAKPAAKKAPAAKAPAKATTRKTPAKPASRKRA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcgcgcatattggcaggggcagattcgtctggcgctggtatccattccggtg
gagatctatgccgccaccaagtccggcgcgcagatcgccttccaccagatacaccagccc
agcggcaagcgcgtccgttatgaaaagaccgttcccggcctgggcccggtcgatccggag
gacatcgtcaagggctatgagctgtccaagggcgactatgtgctgctccagcccgacgag
atcgacgcggtgaagctggagagcaagaagacgctcgaactcacccagttcgtcgacgcc
agcgagatcgatgtcctctattatgagcggccctattatgtcgtgcccgccgacgatctg
gcggaggaagccttcatcgtcctgcgggaggcgctgcggcggacgaagaaggtcgggctg
ggccagcttgccatgcggggccgggaatatatcgtctcgctgaagccttgcggccggggc
atggttctggaaacgctgcgctatgccgatgaggtgaaccgcgcccagagctatttccgc
gacatagaggatgcgaagcccgatgcggagctgctcgaccttgccgagacgctgatcgag
aagaagaccgcgcccttcaagcccgacagcttccacgaccgctatgtggacgcgctggaa
aggctgatcgaaaagaagaagaagtcgaagggccgccgcgtcatagaggaggaagaggag
ggcgcggctccgcgcggcagcaatgtgatcgacctgatggcggcgctcaagaagtcggtc
ggttccggcgcggcttcttccgccgcgaaaccggcggcgaagaaggcgcctgccgccaag
gcgcccgccaaggccacgacgcgaaagacccccgccaagccggccagccgaaaacgggcc
tga
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