KEGG   Sphingobium sp. YBL2: TZ53_22600
Entry
TZ53_22600        CDS       T03855                                 
Name
(GenBank) conjugal transfer protein
  KO
K03194  type IV secretion system protein VirB1
Organism
syb  Sphingobium sp. YBL2
Pathway
syb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:syb00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    TZ53_22600
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:syb02044]
    TZ53_22600
Secretion system [BR:syb02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   TZ53_22600
SSDB
Motif
Pfam: SLT
Other DBs
NCBI-ProteinID: AJR26645
LinkDB
Position
2pYBL2-2:43808..44473
AA seq 221 aa
MILDVATLLSLAGACAPTVAPETLISIVHTESRFNSLAIGVNSPGVRAPKPATKAQAIAA
ARSLIGRGYNIDLGLGQINSANLGWLGLSVENAFEPCSNLAAAARVLATNYQAVARLAPS
RDHAIATALSLYNTGDRQRGFRNGYVARVYASASAVIPLIRSTAPATRNSVVAPAAPAFA
PPPDTPVSPPAAAGWKTAARASQASLMVFGDGAASQKGQHP
NT seq 666 nt   +upstreamnt  +downstreamnt
atgatcctcgatgtcgccacccttctttcgcttgcaggagcttgcgcaccgacggtggcg
cctgagacgctcatttcgatcgtccacacggagagccggttcaacagtctcgcaatcggg
gtcaatagtcccggcgtgcgcgcgccaaagcccgcgaccaaggcgcaggcaatcgctgcg
gcgcgcagcctgattggtcgaggctacaacatcgatctcggcctggggcagatcaacagc
gccaatctcggctggctggggctttcggtggaaaatgcattcgagccctgctccaaccta
gccgccgccgcgcgtgtcctagcgaccaactaccaggcggtcgcgcgccttgccccgagc
cgcgatcacgcgatcgcgaccgccctgtcgctgtacaataccggcgaccggcagcgcggc
tttcgcaacggctatgtcgccagggtctatgccagcgcgtcggccgtcattccgttgatc
cggagtacggcgccggcaaccagaaactcggtcgttgccccagcggctccggccttcgct
ccgccacccgatacccctgtttcgcccccggccgcagccgggtggaaaacagcggcgagg
gcgagccaggcctcgctcatggtgttcggcgacggggccgcatctcagaaaggacagcat
ccatga

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