Sphingobium sp. YBL2: TZ53_23090
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Entry
TZ53_23090 CDS
T03855
Name
(GenBank) transcriptional regulator
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
syb
Sphingobium sp. YBL2
Pathway
syb02020
Two-component system
syb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TZ53_23090
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TZ53_23090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
syb02022
]
TZ53_23090
Two-component system [BR:
syb02022
]
OmpR family
QseC-QseB (quorum sensing)
TZ53_23090
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
HTH_11
OKR_DC_1_N
DUF6416
Motif
Other DBs
NCBI-ProteinID:
AJR26726
LinkDB
All DBs
Position
2pYBL2-2:144919..145578
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AA seq
219 aa
AA seq
DB search
MRILIVEDDEVLLEGLRAGLAIEGFVADAVETIEDARHAMEVVEYDAVVLDIALPDGSGL
DLLHEWRRAGLVTPVLLLTARNAIRDRIDGLDRGADDYLGKPFDLDELAARIRAIGRRAK
GVTSTTLMWRDVEIDIPLREVRRGSEPVMLSRREFAVLQILIEQPGRVFSRAQLEDRLYG
WQEEVGSNAVEVHIHNLRAKLGRDLIETVRGEGYRVPSR
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatattgatcgtcgaagacgacgaggtcttgctcgaggggctgcgcgctggactg
gccattgagggtttcgtggccgacgcagtcgagaccatcgaggacgcccgccatgccatg
gaggtggtggagtacgatgccgttgtcctagatattgctttgcccgacggttccggcctg
gacctgctgcacgagtggcgccgcgccgggctggtgacgccggtccttctgttgacggcg
cgcaacgcgatacgggatcgcatcgatgggctcgatcgcggcgctgacgattatctgggc
aaacccttcgatctcgacgaactcgcggcgagaatccgtgcgataggtagacgcgcaaaa
ggggtcacttccaccacgctgatgtggcgggatgtcgagatcgacattcctcttcgcgag
gtgcggcgaggcagtgaaccggtgatgttgtcgcggcgggaattcgccgtattgcagatc
ctgatcgagcagccgggccgggtgttttcgcgcgcgcagctcgaggaccgcctctacgga
tggcaggaggaggtcgggagcaatgcggtggaagtgcacatccacaacctgcgcgcgaag
ctcggccgcgacctcatcgagaccgttcgcggtgaaggctatcgagtgcccagtcgatga
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