Sphingobium sp. YBL2: TZ53_23320
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Entry
TZ53_23320 CDS
T03855
Name
(GenBank) FecI sigma-24 factor
KO
K24073
RNA polymerase sigma factor CnrH
Organism
syb
Sphingobium sp. YBL2
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syb03021
]
TZ53_23320
Transcription machinery [BR:
syb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TZ53_23320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_1
PhyR_sigma-like
Cas9_b_hairpin
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AJR26758
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Position
2pYBL2-2:complement(185466..186032)
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AA seq
188 aa
AA seq
DB search
MTACLPDCSDGELAALALGGRQAAYGELVRRHQGWVHRLVRSHVGSMDEALDVTQASFVA
AFAALNRYDVTRPFQVWMSRIVINKCHDWRRRRAVRNFFALALPLGEADGVADDAPLPDQ
AIGAEQQLAQAMKAIAALPSSLKDTLILRTIDEKSEAETAEILGISQKAVETRLYRARAR
LSEILKKV
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgtgcctccccgactgctcggacggggagctcgcggctctggcgcttggaggc
cggcaagcggcctatggcgagctggtccgccggcatcaaggttgggttcaccggctcgtg
cgcagccatgtcggatctatggatgaggcattggatgtcacccaggcgagcttcgtcgcg
gcctttgccgcactcaaccgctatgacgtaacccgacccttccaggtctggatgtcccgg
attgtcatcaacaaatgccatgactggcggcgtcggcgagcggttcgaaatttctttgcc
ctagccctaccgctcggcgaggcggacggcgtcgccgacgacgcaccgctgcccgatcag
gcgatcggggccgaacagcagctcgcgcaagcaatgaaagcgattgctgccctgccgtct
tccctcaaggacacgcttattttgcgtacgatcgacgagaaatcggaagctgaaaccgcc
gaaattctcgggatcagccagaaggcggtcgaaacgcgcctctatcgagctagggcacgc
ctttcggaaatattaaagaaagtttga
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