Synechococcus elongatus PCC6301: syc0198_d
Help
Entry
syc0198_d CDS
T00163
Symbol
phy
Name
(GenBank) phytochrome
Organism
syc
Synechococcus elongatus PCC6301
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
PAS
GAF_2
PAS_9
GAF
HATPase_c
PAS_3
PAS_8
HisKA
GAF_3
Diguanyl_cycl_sensor
PAS_11
Motif
Other DBs
NCBI-ProteinID:
BAD78388
UniProt:
A0A0H3K2L9
LinkDB
All DBs
Position
225956..229453
Genome browser
AA seq
1165 aa
AA seq
DB search
MVEEFNPSTYCSILRLDRETQQIWTVVAPSLPKEYCQAIDGATVGPNTGSCGAAIFRRQP
VLVADIESDPLWANDRDTALIHGLRSCWSFPLIAHNGQVQGTLAVYQPFPQTPSEDQLQQ
CLTVAQLAAIAFARSLDRQQLQDSEQRFRSLFTFNPDAVYSFDLQGIYQSMNSAGFEILD
RQADQIIGKHFSDVVISEDLEKCQQHFDQACKGEAQHYEIRINGRNGQLFYLDVSKFPIV
VNNKIVGVFGIAKDITQRKQITADLQQALMQSNKQTEQLRRLGNAAIATAELQDHQELVK
YLVEQVRLTIRAHQAVISLTRCDDWSQSINAISLSDKYAAWKNYDELSTGEGIYTLICET
NQPLVLTQEELEKHPRWRGFGDQADKHPPMRGWLAVPLFDPNGRNLGVLQLSDKEEGEFD
DDDLAIAQQFAQMTVAVLENNRLLNEVLTAEQQLKEQLSFNSTITDCMAEGLLAVDERGK
LAFANPTAQEWLAIDKSELSQQSLDQLLPLDLTAWNQGGVGNQGELKLKGRILQYEARPL
VGPVAERGWVLVLHDVTAQRQVDQAMRERDQFFSLSLEMFCMVDLRGRFIQVNPAFAATL
RYSTAELVGRPYLELVDLGDRSQIATTIRRLKAGLLIHDLVIRVWDKAGELHWLQISAAL
GDDRVIYCVARDVTEQRAIQEQILQQNLLLRMAGQTAKLGGWSVELPSREVIWSPETFSL
LGFTDEDEPDLEEALSLYPPAERALVTKALEDCIQQGISFDFDVAVHNTSGFLLDARVTG
QAVRDETGAIVRISGAFQDVSDRKRAQREAQRLADRLRTTLESITDGFYTLDENWRFSYL
NQEGAQQLGVNVEETLGQMVWTAFPGSYESELGHIYRQAIATGEAAHFETYYEPFGRWFE
VHAYPSEDGLAVYFRDVSERRQTEQNLRITLRELERSNQELQEFAFVASHDLQEPLRKIQ
AFSDRLIARTSNLDDESQDYLRRMASAAGRMQTLIIDLLNYSRVNTRGLPLQPLSLDQVL
DDVLVDMEASLDQASAIVERQPLPTIQGDAGQFRQVFQNLLSNALKFQSADNQPLIQIYS
ELTEAGQLRLCIADNGIGFDEKYLDRIFNPFQRLHSRDAYAGTGIGLAIVKKIIERHGAT
ITAKSIPGQGSVFFITFPVTEKDFR
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggtagaggagttcaatccgagcacttactgctcaattttgcgcctcgatcgggagact
caacagatttggacagtcgtagctcccagcctgcccaaagagtattgccaagcgattgat
ggcgccacagtggggccaaacacgggaagttgcggggcagctattttccggcggcaacct
gttctcgttgcggacatcgaatcggatccgctttgggcaaacgaccgcgatactgctctc
atccatggcttgcggtcttgctggtcgtttcccttgattgctcataatgggcaagttcaa
gggacattagcagtctatcaaccatttccacagacaccctcggaagatcaactgcagcag
tgtctcaccgtggcacagttagcagcgatcgcgttcgcccgatcactcgaccgccaacaa
cttcaagatagtgagcagcgttttcgatccctgtttaccttcaaccctgatgccgtctac
tcatttgacttgcagggtatctaccagagcatgaattctgctggcttcgaaattttggat
cgacaagctgatcaaatcatcggtaagcatttttcagatgttgttatctcagaagacctt
gaaaaatgtcaacagcattttgaccaagcttgcaaaggagaggcgcagcactatgaaata
aggattaacggcagaaacggtcaactcttttacttagatgttagtaaatttccgattgtt
gtaaacaacaagattgttggagtttttggtattgccaaagatattactcagagaaagcaa
attactgctgatttacaacaggctttgatgcagagtaataagcagacagagcagcttcgt
cgtttaggaaatgctgcgatcgctactgcagagctccaagaccatcaagaattggtcaaa
tatcttgtggaacaagttcggcttaccattagggctcaccaagccgttattagtttaact
cgatgtgatgactggagtcagtcaatcaatgctatctctctctctgataaatatgctgct
tggaagaactatgatgaactatccactggcgaaggtatttacaccctcatttgcgaaacg
aatcagcccttggttctaactcaagaagagcttgaaaaacaccctcgctggcgaggattt
ggcgaccaagcagataagcatcctcccatgcgaggctggttggctgtacctctgttcgat
cccaatggccgcaatctcggtgtccttcagctctctgataaagaggaaggcgaatttgat
gatgatgatctagcgatcgcccagcaatttgcacagatgacagtggcggttttggaaaat
aaccggctcctcaatgaggtgctcactgctgaacaacaactgaaggagcagttgagcttc
aactctacaatcacggactgtatggctgagggactgttggccgttgatgaacgtggcaaa
ttagcttttgccaatccaacggcgcaggagtggctggcaatcgacaagtcagaactttcg
caacaatccctcgaccaactcctaccactagatctgactgcttggaatcaaggaggagtt
ggcaatcaaggggagttgaagcttaaaggacggattttgcagtacgaagcccgtccctta
gtaggccccgtagcagagagaggttgggttttagtcctccacgacgttacagcccagcgt
caagttgaccaagccatgcgggagcgagaccagttttttagcctttccctcgagatgttc
tgcatggtcgatttacgagggcgtttcattcaggtcaatccagcctttgctgcaaccctt
cgctacagtaccgctgagctcgttggtcgcccctatctcgagttggtcgatttgggcgat
cgcagtcagatcgcgactacaattcgccggttgaaagccgggcttctcatccacgatcta
gtcatccgcgtctgggacaaagcaggtgagttacactggctacaaatcagtgcagccctc
ggggacgatcgcgtcatctattgcgtagcccgcgacgttacagagcaacgagctattcaa
gagcaaatccttcagcaaaacctactgctaagaatggctgggcagactgccaagctgggc
ggctggagcgttgagctacccagtcgagaagtgatttggtcgccagaaacctttagtttg
ctgggttttactgatgaagatgaacccgatttggaggaagcccttagcctctatccccct
gcggagcgagccctagtcacaaaggcgctagaggactgtattcagcagggaattagcttt
gattttgatgtagctgttcacaatacttctggcttcctgctcgatgcacgagtgacgggg
caagccgttcgtgatgaaactggagcgattgtaagaatctcgggggcatttcaggatgtt
agcgatcgcaaacgggcccaacgtgaggctcagcgactggcggatcggctacgaaccacg
cttgaaagcattactgatggcttttataccctcgatgaaaactggcgatttagctacctc
aatcaggagggtgctcagcagctgggcgtcaatgtagaagaaacgctaggccaaatggtc
tggactgcttttcctgggtcctacgagagcgaactcggccatatttatcggcaagcgatt
gctacgggcgaagccgctcattttgagacctactatgaacccttcggccggtggtttgaa
gtccatgcttacccttctgaagacggtttggcagtctacttccgcgatgtttcagaacgt
cggcaaaccgaacaaaatttacggattacgctgcgagagctagagcgcagcaaccaggag
ctgcaggaatttgcctttgttgcctcccacgaccttcaggagccactgcgcaaaattcag
gctttctcggatcgcctcattgctcggaccagcaacctagatgatgaatctcaggattat
ctgaggcgtatggcctctgcagcaggacgaatgcagaccttgatcatcgatttgttgaac
tactcccgtgtcaacactcggggtctgcccttacagcccttatccctcgaccaagtactc
gacgatgtcttggtcgatatggaagctagtctcgatcaggcctctgcgatcgtggagcgg
cagcccttgccaactatccagggtgacgccggtcagtttcgccaggttttccagaatctg
ttgagtaatgccctgaaatttcagtcagcagacaaccaaccattaattcagatttacagt
gagctgacagaggctgggcaattgaggttgtgcatcgctgataatggcattggattcgat
gagaagtatctagaccgaattttcaaccccttccagcgcttacatagtcgcgatgcctat
gctggtacagggattggactagcgatcgtcaaaaaaatcattgagcgccacggcgcgacg
attactgcaaagagtatccccggacaaggtagtgtatttttcattacttttcctgtaact
gaaaaagatttccgatga
DBGET
integrated database retrieval system
