Synechococcus elongatus PCC6301: syc0328_c
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Entry
syc0328_c CDS
T00163
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
syc
Synechococcus elongatus PCC6301
Brite
KEGG Orthology (KO) [BR:
syc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syc03016
]
syc0328_c (truB)
Enzymes [BR:
syc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
syc0328_c (truB)
Transfer RNA biogenesis [BR:
syc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
syc0328_c (truB)
Prokaryotic type
syc0328_c (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
BAD78518
UniProt:
Q5N5A0
LinkDB
All DBs
Position
complement(376996..377880)
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AA seq
294 aa
AA seq
DB search
MSSEGFVNLDKPAGWTSHDCVAKLRRLLRERRIGHGGTLDPAVTGVLPIAVGRATRLLPY
LPSGKTYVGTIRFGLQTSTDDLTGDRLAEADTSHLSREAIEAALPQFLGHIQQQPPQVSA
VQVQGQRLYQLARRGEAPTELPWRTVEIQSIRILQWRSGSQAELSVEIHCGAGTYIRSLA
RDLGAVLGVGGTLAELRRTASSGFDLNQSTPLTELLDGAAVPLLALDLPLQHLAKVQLSA
ETSDRWRQGQAMPVPDSVLPDAAPVRVYDLNGQFLGIGAIAAGLCKPKVVLAAL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggaagggtttgtcaacctcgataagccagcgggctggacttcccatgactgt
gtcgccaagttacggcgtctgttacgggagcggcgtatcggccatggtggcacgcttgat
ccggcagtcacaggtgttctgccgatcgcggtgggacgagccacgcggctcctaccctat
cttcccagtggcaaaacctacgtcggcaccattcgcttcgggttgcagaccagtacggac
gatctgacgggcgatcgcctggcagaagccgataccagccacttgtcgcgagaggcaatc
gaggcggcgctaccccaattcctcggccacattcagcagcaaccgccccaggttagtgcc
gtacaagtgcaagggcagcgactctatcagcttgctcggcgcggggaagcccccacggag
ctcccttggcgcaccgtagaaattcagtcaattcgaattctccagtggcgatcgggcagt
caagccgaattatctgtcgaaatccactgtggtgctggcacttacatccgttctctagcg
cgagacctcggagccgtgctgggggtcggtggcaccctagcagagttgcgtcgtactgcg
agtagtggctttgatctgaaccagagcacgccgctgactgaactgctcgatggagcagcg
gtgccgctcttggctttggatttgccattgcagcatttagccaaagttcaactgagtgcc
gaaaccagcgatcgctggcgacaaggacaagcgatgcccgtgcctgacagtgttcttccc
gatgcagctccagtccgtgtctatgatctcaacggccagttcttaggaatcggcgcgatc
gcggcaggactgtgcaagcccaaagtcgtactcgcggctctttga
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