Synechococcus elongatus PCC6301: syc0494_c
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Entry
syc0494_c CDS
T00163
Symbol
cpcE
Name
(GenBank) phycobilisome maturation protein CpcE
KO
K02288
phycocyanobilin lyase subunit alpha [EC:
4.4.1.32
]
Organism
syc
Synechococcus elongatus PCC6301
Pathway
syc00196
Photosynthesis - antenna proteins
syc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
syc00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
syc0494_c (cpcE)
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
syc00194
]
syc0494_c (cpcE)
Enzymes [BR:
syc01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.32 C-phycocyanin alpha-cysteine-84 phycocyanobilin lyase
syc0494_c (cpcE)
Photosynthesis proteins [BR:
syc00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Phycocyanin (PC)
syc0494_c (cpcE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_PBS
HEAT_2
HEAT
TPR_Trm732_C
Arm
HEAT_EZ
Ig_TMM62
Motif
Other DBs
NCBI-ProteinID:
BAD78684
UniProt:
A0A0H3K0X7
LinkDB
All DBs
Position
complement(554755..555576)
Genome browser
AA seq
273 aa
AA seq
DB search
MSEAGTPAEALTYEQAIANLRQTADTGDRYYAAWWLGRFRMKQPEAIALLIEALDDSLDR
APDGGYPLRRNAARALGKLESPEAIAPLIACLQCEDYYVREAATQSLGELQATVAVPALL
KLLEGGPEAIAAIPGKPHLTQPADAVMETLGQLRATVAVPVVQAFLEHPIDKIRLAAARS
LYQLTGDDHYAERVVQGLSDPKLQRRRSALMDLGAIGYLPAAPQIAQTLAENSLKLISLK
GLLDTHLRQQTPEAIAELDESAIALMDLMDGLL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagcggggacgccagctgaggcgctgacctacgaacaagcgatcgcgaatctc
cgacagacagcagatacgggcgatcgctactacgcagcttggtggctgggtcggtttcgg
atgaagcagccagaggcgatcgcgctgttgattgaagccttagatgatagcctcgatcgc
gcacctgatggcggctatcccctacggcgcaatgccgcacgcgcattgggaaaactggaa
agtcctgaggcgatcgcaccgttgattgcctgcttgcagtgcgaggactactacgttcgc
gaggctgcaacccagtccttaggtgagttgcaagccacagttgcggttccagcgttattg
aaactgttagagggcggacctgaggcgatcgccgcgattccgggtaaaccccatctgact
cagccagcggatgcggtgatggaaaccctgggacaactgcgagcaacggttgctgtccct
gtggtgcaagcgtttctggagcatccgatcgataaaattcgcctagcagccgcacgatcg
ctctatcagctcaccggcgacgatcactatgctgagcgggttgttcaaggtttgagtgac
ccgaaattacagcgccggcggtcggccctgatggatttaggggcgatcggctatttgccc
gctgcaccgcaaattgcccagacgcttgccgagaatagtctcaaactgatctcgctcaaa
gggctgctcgatactcatctgcggcaacagacccccgaggcgatcgcagagttggatgag
tcggcaatcgcgctgatggatttgatggatggtttgctgtag
Synechococcus elongatus PCC6301: syc0493_c
Help
Entry
syc0493_c CDS
T00163
Symbol
cpcF
Name
(GenBank) phycocyanin alpha-subunit phycocyanobilin lyase
KO
K02289
phycocyanobilin lyase subunit beta [EC:
4.4.1.32
]
Organism
syc
Synechococcus elongatus PCC6301
Pathway
syc00196
Photosynthesis - antenna proteins
syc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
syc00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
syc0493_c (cpcF)
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
syc00194
]
syc0493_c (cpcF)
Enzymes [BR:
syc01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.32 C-phycocyanin alpha-cysteine-84 phycocyanobilin lyase
syc0493_c (cpcF)
Photosynthesis proteins [BR:
syc00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Phycocyanin (PC)
syc0493_c (cpcF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
HEAT_PBS
HEAT
Cnd1
DUF4042
DBR1
TPR_Trm732_C
HEAT_EZ
Motif
Other DBs
NCBI-ProteinID:
BAD78683
UniProt:
A0A0H3K3J9
LinkDB
All DBs
Position
complement(554125..554748)
Genome browser
AA seq
207 aa
AA seq
DB search
MSTELIAAVEAADSAEGLVRAVAALSAARTDAAIPTLISVLAFNNPGAAVVAVDGLIQLG
SPAAQAILNNLDDYNYGARAWALRALAGIGEPAALPLLLSAAREDFSLSVRRAATYGLGR
VRWADLSESDRLAQQQQCYETLKLCLQYDPEWVVRYAAAAALETLAPAATQLQSAIAETL
NRQAHSDEERAVQARSRLAERRLAGGV
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggaattgatcgctgctgttgaagccgctgattcggcggaaggactggtgcgg
gcggtagcggcactgtcggcggctcgtactgatgcggctatcccgactttgattagcgtt
ttagcgttcaacaacccaggggctgcggtggttgcggtcgatggtctgattcaactgggt
tctccagcggcacaagccattctcaataatctggatgactataactacggcgcaagagct
tgggctctgcgcgccttagctggcattggagaaccggcagccctgcccctgctcctgtca
gcggcgcgggaagatttttcgctcagtgtgcggcgggcggcgacttacggcttggggcga
gtgcgctgggcagatctgtccgagagcgatcgccttgcccaacaacagcagtgctatgaa
accctgaagctctgccttcagtacgatccggaatgggtggtgcgctatgcagcagcagcg
gcactggaaaccttagctccggctgcaacccagctccagtctgcgattgcagaaactctc
aaccggcaggctcacagcgatgaggaacgagccgttcaggcgcgatcgcgtttagccgag
cgacgcctagccggtggtgtataa
DBGET
integrated database retrieval system