Synechococcus elongatus PCC6301: syc0560_c
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Entry
syc0560_c CDS
T00163
Name
(GenBank) hypothetical protein
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
syc
Synechococcus elongatus PCC6301
Pathway
syc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
syc0560_c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syc03400
]
syc0560_c
DNA repair and recombination proteins [BR:
syc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
syc0560_c
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
syc0560_c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
SYMPK_PTA1_N
Motif
Other DBs
NCBI-ProteinID:
BAD78750
UniProt:
Q5N4L9
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All DBs
Position
complement(627136..627936)
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AA seq
266 aa
AA seq
DB search
MSRTYTTTAIVLKATPLGEADRLLTLLSPDQGLLRVVATGARKPRSKLGGRTALFVVGDC
LIACGKSLDRLQQVETLTSHTALSGDLARLAAAQYLTELVLAQALERHPQPELFALLCRD
LARIETQSGLEVLPYLLQSTWQLLAWAGWAPQTHYCCLTQQAVQPRLEQSRWRVRYSPSL
GGVLADTAAYQRRPNQRELLLTATELAALQQIPTSQTVLPLASLPREAWQMLERALRHSA
EYHLERPLQSALLLETLLTGSHVASV
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcgcacttacaccaccactgcgatcgtgctcaaggccacgccccttggggaggcc
gatcgcctgttaaccctgctctcgccggatcaaggactcctgcgagtcgtcgcgacgggg
gcccgcaaaccgcgatcaaaattgggaggccgcaccgctctctttgtggttggcgactgt
ttgattgcctgcggcaaaagtctcgatcgtctccagcaagttgaaaccttgaccagccat
acggccctcagtggtgacttggcccgcctggcagcggcgcaatatctcaccgaactggta
ctcgctcaggcccttgagcgccatccccaacccgaactcttcgccctgctctgccgcgat
ctcgctcggattgaaacccagtcagggcttgaagttttaccctacctcctccaaagcacc
tggcagctgttggcctgggcgggctgggctccgcaaacccactattgctgcctgactcaa
caggctgtgcaaccgcgactggaacaatctcgttggcgagtgcgctatagccccagtttg
ggcggtgtgttggccgatactgctgcgtatcagcgtcgccccaatcagcgagaattgttg
ttgaccgccacggagttggctgccttgcaacagattcccaccagccaaacggtactgccg
ctggcaagcctgccccgcgaggcctggcaaatgttggagcgagcactccgccactctgcc
gagtatcatctggaacggcccttacaatcagcgctgttactggagacgttgctgacagga
tcccatgttgcctctgtctga
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