Synechococcus elongatus PCC6301: syc0888_d
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Entry
syc0888_d CDS
T00163
Symbol
clpB
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
syc
Synechococcus elongatus PCC6301
Brite
KEGG Orthology (KO) [BR:
syc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
syc03110
]
syc0888_d (clpB)
Chaperones and folding catalysts [BR:
syc03110
]
Heat shock proteins
HSP100
syc0888_d (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_22
Sigma54_activat
AAA_16
AAA_23
TniB
nSTAND3
IstB_IS21
Mg_chelatase
AAA_14
RuvB_N
AAA_18
NACHT
AAA_7
NBD_SMAX1
AAA_24
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BAD79078
UniProt:
A0A0H3K1I6
LinkDB
All DBs
Position
990910..993597
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AA seq
895 aa
AA seq
DB search
MQPTDPNRFTDQAWDAIVESQTVARQLRQQQLEVEHVLLALLDQESGVAAEILAKAGVAV
ANLRQPLEDFARRQPRNASGTQLYLGRGLDRLLDLAERARELWQDEFIGVEHLLMGFVED
DRIGRRLAQGLKLDAKTLETTIQALRSPAADEAEAEESEPSYPFLSKYGRDLTALAEQEK
LDPVIGRDLEIRRVIQVLSRRSKNNPVLIGEPGVGKTAIAEGLAQRIVAGEVPDSLKQRR
LISLDMGSLIAGAKYRGEFEERLRAVLHEVTHSDGQMVLFIDELHTVVGAGAGQQGSAMD
AGNLLKPMLARGELRCIGATTTDEYRRTIEKDPALERRFQQVYVSQPSVEDTIAILRGLK
ERYEGHHGVKITDGALMAAAKLSHRYISDRFLPDKAIDLIDEASAQLKMEITSKPSELED
LERRLLQLEMEQLSLSGENGQASVHSDRLQQIQTELQTLQEQQARLNQQWQQEKQLLEEL
GRLQEEEETLRQQVNQAEREHDLNKGAELKFGQLEALQQQRQAIEEQIQALHANGQTLLR
EQVEEADIAEIVARWTNIPVQRLLESERQKLLQLESFLHQRVIGQDEAVVAVAAAIRRAR
AGMKDPSRPIGSFLFLGPTGVGKTELARALANCLFDAEDALIRFDMSEYMEKNSISRLIG
APPGYIGYEEGGQLSEAIRRHPYAVVLFDEVEKAHPDVFNLLLQVLDDGRITDSQGRTID
FCNAVIVMTSNIGSQFILEMGEEEASLDAVELKVLGALRQHFRPEFLNRIDDTILFQPLS
RGQLQQIVDIQLQRLKRLLAEQAIALNVTPAAAANLADRGYDPVYGARPLKRAIQRLIEN
PVASLILEQQFDAGDALIVDVDAEGQLQFQVSKPVTATVVEPDDSPAIAVEAIPS
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccaccgaccccaatcgttttacagaccaagcctgggatgcgatcgtcgaatcg
caaactgtggctcgccaactgcggcaacagcagctggaagtggagcacgtcctcctggcc
ttgctcgatcaggagtcgggggtagctgcagaaattttggcgaaagcaggggtggcagtt
gccaacctgcggcaacccctcgaagactttgcacgacggcagcctcgcaatgcctcgggt
acgcagctctacctaggacgcggcctcgatcgcctgctggacttagcagaacgggcgcga
gaactctggcaagacgagttcatcggcgttgagcatttgctgatgggcttcgtggaggac
gatcgcatcggtcgtcgcttggcgcagggtctcaaactcgatgccaaaacactcgagaca
acgattcaagcgttgcgatcgcccgctgccgatgaggctgaagcagaagagagcgaaccc
agctatcccttcctcagcaagtacggtcgcgatctgacagcgctggcggaacaggaaaaa
ctcgatccggtgattggccgtgatctggaaattcgtcgcgtcattcaagtgctatcgcgg
cgcagtaagaacaatcccgtcctgattggtgaaccgggtgtcggcaaaactgcgatcgcc
gaaggcttggcccagcggattgttgccggtgaagtaccggattcgctcaagcaacggcgg
ctgatcagcctcgatatgggttccctgattgctggtgccaaatatcgcggtgagttcgag
gagcggctgcgggcagttctgcacgaggtcacccactccgatggccaaatggtgctgttc
atcgacgagctacacaccgtcgtcggagctggggcaggtcagcaaggcagcgccatggat
gcgggcaacctgctcaagccgatgctggcgcggggcgaattgcgctgcattggcgcgaca
acgaccgatgaatatcgccgcacgatcgagaaggatccagccctcgaacgacgcttccaa
caggtctacgtcagccagcccagcgtcgaagacacgatcgcaattctgcgcggcctcaag
gaacgctacgagggccaccacggcgtcaagattaccgacggcgctctgatggcagcggct
aaactctcccatcgctacatcagcgatcgcttcttgcccgataaagcgatcgacctgatc
gacgaagcctcagcgcaactgaagatggagatcacctccaaacccagcgagctggaggat
ttggaacgacggctcctgcaactggaaatggagcaactgtcacttagcggcgagaacgga
caggccagcgttcacagcgatcgccttcagcaaatccagactgagctgcaaacgctgcaa
gaacagcaagcccgactcaatcaacagtggcagcaggaaaagcaactactggaagaactc
ggccgcctgcaggaggaagaagaaaccctacgtcagcaggttaatcaggccgaacgcgag
catgacctcaacaaaggtgctgagctgaaatttgggcaactggaagccctgcaacaacag
cggcaggcgatcgaggagcagattcaagccctgcacgccaatgggcaaaccttgctgcgc
gagcaggtagaagaagccgatattgccgaaatcgtggcgcgttggaccaatattccggtg
caacgtttgctggagtcggagcgccagaagctgctccagctcgaaagtttcttgcaccaa
cgggtgatcggccaagatgaagcggtcgtcgccgtcgctgcggcgattcggcgagcacga
gcggggatgaaagatcccagccgcccgatcgggtcgttcctgttcttggggcccacgggt
gtcggtaaaaccgagctagctcgcgccctcgccaactgtctgttcgatgccgaagatgcg
ctgattcgcttcgacatgtcggagtacatggagaagaattcgatctcgcgcctgattggg
gcgccccccggctacatcggctacgaagaaggcgggcagctctcagaagccatccggcgc
catccctacgcggtagtgttgttcgacgaagtcgagaaagcgcatcccgatgtgtttaac
ctactgctgcaggtgctcgacgatggccggatcaccgactcgcaaggccgcaccatcgac
ttctgcaacgccgtgattgtgatgaccagcaacattggcagccagttcatcctggagatg
ggtgaagaggaagccagcctcgacgcggtggagctgaaagtgctgggagcgctgcggcaa
catttccggccagaatttctcaaccggatcgacgacacaatcctgttccaaccgctttct
cgcggacagttgcagcagattgtggacatccaattgcagcggctcaaacgactgctggcg
gagcaggcgatcgctctcaacgtcacaccagcagcggcagccaatctggccgatcgcggc
tacgaccccgtctacggcgcacgccccctgaagcgggcaatccagcggctaatcgaaaat
cccgtcgcttcactgattcttgaacagcaatttgacgccggtgatgcactgatcgtcgat
gtcgatgccgagggacagctgcaatttcaagtcagtaaacccgttacagccactgttgtc
gagccggatgacagccctgcgatcgcagtggaagccattccctcttag
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