Synechococcus elongatus PCC6301: syc1392_c
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Entry
syc1392_c CDS
T00163
Symbol
phrA
Name
(GenBank) DNA photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
syc
Synechococcus elongatus PCC6301
Brite
KEGG Orthology (KO) [BR:
syc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syc03400
]
syc1392_c (phrA)
Enzymes [BR:
syc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
syc1392_c (phrA)
DNA repair and recombination proteins [BR:
syc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
syc1392_c (phrA)
Prokaryotic type
syc1392_c (phrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Coatomer_b_Cpla
Motif
Other DBs
NCBI-ProteinID:
BAD79582
UniProt:
P05327
Structure
PDB
PDBj
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All DBs
Position
complement(1507742..1509196)
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AA seq
484 aa
AA seq
DB search
MAAPILFWHRRDLRLSDNIGLAAARAQSAQLIGLFCLDPQILQSADMAPARVAYLQGCLQ
ELQQRYQQAGSRLLLLQGDPQHLIPQLAQQLQAEAVYWNQDIEPYGRDRDGQVAAALKTA
GIRAVQLWDQLLHSPDQILSGSGNPYSVYGPFWKNWQAQPKPTPVATPTELVDLSPEQLT
AIAPLLLSELPTLKQLGFDWDGGFPVEPGETAAIARLQEFCDRAIADYDPQRNFPAEAGT
SGLSPALKFGAIGIRQAWRAASAAHALSRSDEARNSIRVWQQELAWREFYQHALYHFPSL
ADGPYRSLWQQFPWENREALFTAWTQAQTGYPIVDAAMRQLTETGWMHNRCWMIVASFLT
KDLIIDWRRGEQFFMQHLVDGDLAANNGGWQWSASSGMDPKPLRIFNPASQAKKFDATAT
YIKRWLPELRHVHPKDLISGEITPIGRRGYPAPIVNHNLRQKQFKALYNQLKAAIAEPEA
EPDS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
gtggcggctccgattctgttttggcaccggcgtgacctgcgcctcagcgacaacattggt
ctggcggcggcgcgggcacaatcagcgcagctgatcggtctgttttgcctcgaccctcag
attctccagagtgctgacatggcgccagcacgggttgcctacctgcagggctgcctacag
gaactccagcagcgttatcaacaggcgggcagtcggctgctattgctccaaggggatcca
caacacctgatcccgcaactggcgcagcagcttcaggcggaagcagtttattggaaccaa
gacattgaaccctacggccgcgatcgcgatgggcaggtcgcagccgctctgaaaacggca
ggcattcgggctgttcaactctgggatcaactgctccatagccccgatcaaatcctcagc
ggcagcggtaatccctacagcgtctacgggccgttttggaaaaattggcaggctcagccc
aagcccacgccggttgccacaccgacagaactggtcgatctctcaccagagcaactaact
gcgatcgcacctctgctgttgtcggaactaccgaccctgaagcagcttggctttgactgg
gacgggggttttccagtggagccgggggaaacagcggcgatcgcccgtcttcaagaattt
tgcgatcgcgcgatcgccgactacgatccccagcgcaattttccggcggaagcaggaacc
tcgggcttgagtcccgctttgaaattcggggcgatcggtattcgtcaggcttggcgggct
gccagtgcagcccatgccctcagccgcagcgacgaagcccgcaacagcattcgcgtttgg
cagcaggaactcgcttggcgggagttctatcagcatgcgctctaccatttcccgagcctg
gccgatggtccctatcgctcgctctggcagcaattcccttgggaaaatcgcgaggctctg
ttcacggcttggacccaggcgcaaacgggctatccgattgttgatgcagcgatgcgccaa
ctgactgaaaccggctggatgcacaaccgttgctggatgattgttgccagctttttgacc
aaggatttgatcatcgactggcggcgtggggagcagttctttatgcagcacttggtcgat
ggcgatctggctgcaaataacggcggttggcagtggagcgcttccagtggcatggatccc
aaaccgctgcggattttcaatcctgctagtcaggccaagaagtttgatgccacggcgacc
tacatcaaacgttggctgccagaactgcgccatgtccatcccaaggacttgatcagtggg
gagatcacgccgattggacgccgaggctatcctgccccgatcgtgaatcacaacctgcgc
cagaaacagttcaaggcgctctacaaccagctcaaagcggctatcgctgaacctgaggct
gagcccgattcatag
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