Synechococcus elongatus PCC6301: syc1961_d
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Entry
syc1961_d CDS
T00163
Symbol
slt
Name
(GenBank) probable soluble lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
syc
Synechococcus elongatus PCC6301
Brite
KEGG Orthology (KO) [BR:
syc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
syc01011
]
syc1961_d (slt)
Enzymes [BR:
syc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
syc1961_d (slt)
Peptidoglycan biosynthesis and degradation proteins [BR:
syc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
syc1961_d (slt)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_6
TPR_16
TPR_21
TPR_14
TPR_19
Motif
Other DBs
NCBI-ProteinID:
BAD80151
CyanoBase:
syc1961_d
UniProt:
A0A0H3K452
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All DBs
Position
2105775..2107847
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AA seq
690 aa
AA seq
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MSAPSSPSTSQTRPPARSLWRRRRTWFLVGGGGLGAAAVVVLLGIWWRSPTPEAAIALRQ
SDFAELRWQSRFAMDAATRQRARFLYALAIAPDQPQAALQALQGLERSYPLLGPYILKLR
AQVQTQLGQDPRETWRQLLNTYPESPVQAEAVLALGQWDLAPATIQRWPRYPASNELARQ
LAKRQPAEAKRWLLQIAQFGRYRFDIDAVLSELQALPNLTARDRQQIADAYWQRDDYATA
ADLYARSPQTDETLYRQARSLDLTSQPEVARTLYQQLLQRFPQSPERERALVHLVRLDPA
NRDRYLQLLERQFALSLPEALGLAAATEPRYRPILLQRFPASPEAAALRWQQAWQQAEAG
NLPQAIALVTQTRDRSPTIEAAAQAGFWLGRWQTQLGQTDAAQAAWQWVLQQHPDSYYAW
RSAAALGWPVGDFSQVQAQQPAWPQAQSPQALPAGSAVLKELYALGQTEDAWRLWQQEGP
SRDPSPSDRFISALLEASISRYDRAASLLKGLPIDSPLRQRSDFVSTLYPVVFKEEITAA
TQRDRLNPLLVLGLIRQESRFLPGATSVVGARGLMQLMPETAAEVAAELGLQQYDLGDPQ
TNIQLGSRYLRNVLDYWREDSLFAIASYNAGPGNVENWVRRFGRRDRDRWLEQIPFPETR
DYVEKVLSNYWNYLRQSDRSLEQRLQQLDR
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctccttcttccccttcgacatcccagactcggcccccagcccgatcgctctgg
cgccggcggcgtacctggtttttggtcggtggaggtggccttggagcggcagcagtcgtt
gtcttgttggggatttggtggcgatcgcccaccccggaagctgcgatcgcgctgcgtcag
tcggattttgcagagctacgctggcaatcgcgctttgccatggatgccgccactcgtcag
cgggctcgttttctctacgccctggcgatcgccccagatcagccccaagcggccctgcaa
gccctgcaaggactagaacgctcctatccgctgctgggtccctacatcctcaaactccgt
gcccaagttcagacgcaactgggccaagacccccgcgaaacctggcggcaactgctcaat
acctatcccgagagtcctgtgcaggcagaggctgtcctggccttgggacagtgggatctc
gccccagcaacgatccagcgctggcctcgctatccagccagcaatgagttggcgcgtcag
ttggcgaaacggcagcccgcagaagcaaaacggtggttgctgcagattgcccaattcggt
cgctatcgctttgatatcgatgccgtactgtcggaattgcaagctctgcccaatctgact
gcccgtgatcgccaacaaattgctgatgcctattggcaacgcgatgactatgcaacggca
gcagacctctacgcgcgatcgccccagaccgatgaaaccctttatcggcaagcgcgcagt
ctcgacctgaccagtcaacctgaggtggcgcggaccctctaccaacagctgctccagcgt
ttccctcagtcccctgaacgggagcgggctttagtccatctcgtgcgcttggacccagcc
aatcgcgatcgctatttgcaactgctagagcggcaatttgctcttagtctgcccgaggcc
ctgggcctagcagccgccactgaaccgcgttaccgcccgattttgctgcaacggtttccc
gcctcacctgaagcggctgccctgcgttggcaacaggcttggcagcaagccgaggctggc
aatctaccccaagcgatcgccctggtgactcaaacccgcgatcgcagccccaccatcgaa
gcggcagcccaagcaggcttttggttaggtcgttggcagactcagctggggcaaactgac
gcggctcaagcagcttggcaatgggtacttcagcagcatcccgattcctactacgcctgg
cgatcagcggcggcactgggttggccggttggggatttttcccaagttcaagcgcaacaa
ccggcttggccgcaagcccaatctccccaagcgttacccgcgggttctgctgttctgaaa
gagctctatgccctcggccagacggaagatgcttggcggctctggcaacaggaaggccct
agccgcgatcccagccccagcgatcgctttatctccgctctgctggaggccagcatcagc
cgctacgatcgcgccgcgagtctcctcaaaggtctgccgatcgatagcccgttgcggcag
cgatcggattttgtcagcaccctgtatccagtagttttcaaagaggaaattacagcagca
acccagcgcgatcgcctcaatccgctgttggtattaggtctgattcgccaagagtcgcgc
tttttgccaggagcgacatcagtcgttggggcgcgaggcttgatgcagttgatgccagaa
acggccgctgaagtggcggcagaactggggcttcagcaatacgatttgggcgatcctcag
accaatatccagttgggtagtcgctatcttcgcaatgtcttggactattggcgcgaggac
agtctctttgcgatcgctagctacaatgctggccccggtaatgtcgaaaattgggtgcgt
cgctttggccgtagagatcgcgatcgctggttagagcagattcctttccctgaaacgcgc
gattacgtcgagaaagtcctcagtaactattggaactatctgcgtcagagcgatcgcagc
ttagagcagcgtttacaacaactagaccgttaa
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