Synechococcus elongatus PCC6301: syc1993_c
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Entry
syc1993_c CDS
T00163
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
syc
Synechococcus elongatus PCC6301
Pathway
syc00521
Streptomycin biosynthesis
syc00523
Polyketide sugar unit biosynthesis
syc00525
Acarbose and validamycin biosynthesis
syc00541
Biosynthesis of various nucleotide sugars
syc01100
Metabolic pathways
syc01110
Biosynthesis of secondary metabolites
syc01250
Biosynthesis of nucleotide sugars
Module
syc_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
syc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
syc1993_c (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
syc1993_c (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
syc1993_c (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
syc1993_c (rfbB)
00525 Acarbose and validamycin biosynthesis
syc1993_c (rfbB)
Enzymes [BR:
syc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
syc1993_c (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
Motif
Other DBs
NCBI-ProteinID:
BAD80183
UniProt:
A0A0H3K4J8
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Position
complement(2134088..2135161)
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AA seq
357 aa
AA seq
DB search
MKILITGGAGFIGSALIRHLLTTRLDARIINLDKLSYASDLTSLQPFEDSDRYVFEQVDL
LDEAALTRIFQTYQPTAVMHLAAESHVDRSIDSPRPFIESNILGTFNLLEAARRYWQELS
ESEQQTFRFHHISTDEVYGSLGETGLFTEATRYDPRSPYSASKASSDHLVRAWHHTYGLP
VLVTNCSNNYGPWQFPEKLIPVIILNAIAGNPLPIYGNGGNIRDWLYVEDHTRALEQVLL
KGQIGETYNIGGFNERTNLQVVETICDLLDELKPRSQSYRQQMEFVRDRPGHDRRYAIDA
SRIERELGWQPQESFETGLRKTVCWYLNYLDWCQKVRQRSGYDGGRLGLTQEQETTV
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttgattacgggtggtgctggctttatcggctcagccttgattcgacacttg
ttgaccactcgccttgatgctcggattatcaacctcgataaactgagctatgccagcgat
ctgacctcgttgcaaccctttgaggacagcgatcgctatgtctttgaacaagttgatttg
ctggatgaagctgcactgacgcgaattttccagacctatcaaccgactgccgtcatgcat
ttggcggcggaatcccacgtcgatcgctccatcgattcaccccgcccctttatcgaaagt
aatatcctcggcacttttaatctgctagaagctgcccgccgttactggcaagaattatca
gagtcagagcaacagacttttcgctttcatcacatctctaccgatgaggtctatggcagc
ctcggcgagactggacttttcactgaagcaactcgctacgatccgcgatcgccctactcg
gcaagcaaagccagttccgatcatctcgtgcgggcttggcatcacacctatggcctgcca
gttttggtcacgaattgctccaacaactacggcccatggcagtttcctgaaaagctgatc
cctgtaatcatcctcaatgcgatcgccggtaatccactgccgatctacggcaacggcggc
aatatccgcgactggctctacgtggaagatcacacccgcgccctagaacaagtcttacta
aaaggacagatcggcgagacctacaacatcggcggctttaacgaacggaccaatctccaa
gtcgttgagacgatttgcgatctgttggacgaactcaagccgcgatcgcagtcctatcgc
caacagatggaatttgtccgcgatcgccccggccacgatcgccgctacgcgatcgatgcc
agccgcattgagcgtgagctcggttggcaaccccaagaaagttttgaaacgggtctacgc
aaaacggtttgctggtatctcaattatctggattggtgccaaaaagtccgacaacgcagt
ggctatgatggtggccgcctcggcttgacacaggagcaggaaaccacagtatga
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