Synechococcus elongatus PCC6301: syc2048_d
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Entry
syc2048_d CDS
T00163
Name
(GenBank) chromosome segregation protein SMC1
KO
K03529
chromosome segregation protein
Organism
syc
Synechococcus elongatus PCC6301
Brite
KEGG Orthology (KO) [BR:
syc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
syc03036
]
syc2048_d
Chromosome and associated proteins [BR:
syc03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
syc2048_d
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
Motif
Other DBs
NCBI-ProteinID:
BAD80238
UniProt:
Q5N0D2
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All DBs
Position
2199393..2202896
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AA seq
1167 aa
AA seq
DB search
MVTGPNGSGKSNILDALLFALGLSSSKGMRADRLPDLVNSTYASRSRSTVETLVTVTFAL
DDWQPEAEETEEGEGTGLQPGMAEWTVSRKLRVTPSGTYTSTYAMNGEACTLQQLHEQLS
RLRIYPEGYNVVLQGDVTNIISMSPRDRRQIIDELAGVAQFDRKIEQAKGKLEAVKERED
RCRIVEQELIEQRDRLAKDREKAQKYQALRQEQATKQSWEAVLRWRAGQRQVQALQRSLA
QLATDAATDQQTQQTLEQQIQQTEATLDRLNQRVKALGEEELLKLQAALAQQEAEQRQSQ
RQQQELVESQTQTQQQIQALLQTQAQLQTEGQQQAEQARTLQTTIAQTLQPQYQQALEQV
EAARQSAHALAAQSQDWVTRQTSLRQQADAIAAQVEPQRAEQAQLQERQTQLQQQLEATQ
SALVTVTAELETETEQAEGDRAALSQAEAAVVTAADQLVRLEEELQIQQETRDRLLKEQR
DKQRQLDRQESLRQAMQETQGTAAARLILDTGLPGVHGLVAQLGRVEPRYQLALEVAAGG
RLGYLVVDDDGVASAGIELLKQKKAGRITFLPLNRIRAGKQPEIPRWQQPEGLVDLAIAL
VDCDDRYREVFKFVLGGTVVFERLDQARRYMGQYRIVTLDGELLETSGAMTGGSIARRSG
GLSFGSPDSGESAEVRAIRDRLEQLEVILDRSELQILNLQAAIKDAASTLSDRRQQQREQ
QLTVQQRQQTLQRLQQQQQQLNAELQQRQQQASQAQARLAALALELPAALKQLKTLRQAL
AELEDSPIHGEWQQRQTLLQQQEALLQQQETALRQAEQQLQQLQTDQKRLQERAIAARTQ
VSQLRQQQGEQLNRLAQLDEQQRQQATAIAQLQQRQAQLEAQLGQEKVDRDRTERQLQEQ
RSQRQNLVWQQEKRQQQQQELQQQLTDLEVQLQAEQQELPQPLPDIPEMVQQQGIEALQH
ELRSLAKRIQAMEPVNMLALEEYERTQARLEELSEKLTTIEAERTELLLRIENFTTLRRR
AFMESFEAIDRNFQEIFAHLSDGDGSLQLDNPEDPFSSGLNLIAHPKGKPVRRLASMSGG
EKSLTALSFIFALQRYRPSPFYALDEVDSFLDGANVERLARVIRQQAQAAQFIVVSHRRP
MIEAAERTIGVTQARGAHTQVLGIPQP
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
gtggtgacggggccaaatggttctgggaaatccaacatccttgatgcgctgctgtttgcc
ctaggactctcgagttccaagggaatgcgggccgatcgcctgccggatttggtcaattcc
acctacgccagtcgcagccgcagcacggtcgaaacgctggtcacggtcacctttgccctc
gatgactggcagcccgaagccgaagagacagaggagggcgagggcaccggcctacaaccg
gggatggcggagtggacggtcagccgcaagctgcgagtgacgccttctggcacctacacc
agcacctatgccatgaatggcgaggcctgcacgctgcagcaactgcatgagcaactaagt
cggctgcggatttatcccgagggctacaacgtggtcctgcagggggatgtgaccaacatc
atttcgatgagtccccgcgatcgccgccaaattattgatgagctggcgggggtcgcccaa
ttcgatcgcaagattgagcaagctaagggcaagctagaggcggtcaaggagcgggaagat
cgctgccgcattgtcgaacaggagttgatcgaacagcgcgatcgcttggctaaggatcga
gaaaaagcccagaaatatcaagcgctgcgtcaagagcaggcgaccaagcaaagttgggag
gcggtcttgcgctggcgggctgggcagcggcaagttcaagcgctgcagcgatcgctggcc
caactggcgacggatgcggcgaccgatcaacagacgcagcagacgctcgagcaacaaatt
cagcaaactgaggccaccctcgaccgcctcaatcagcgggtcaaggcgctgggagaggaa
gaactgctgaaactgcaagcggcgctggctcagcaagaggctgaacagcggcagagtcag
cggcagcaacaggaactagtcgagtcacaaacccagacgcagcagcagattcaggcgttg
ctgcaaactcaagctcagttgcagacggaagggcaacagcaggcggagcaggcccgaacc
ttacagacaacgatcgcccagactttacagccgcaatatcagcaagcactagaacaagtc
gaagcggcccggcagtcggcccatgccctcgccgcccaatcccaagattgggtgacgcgc
caaacgagtctgcgacaacaggctgatgcgatcgcggctcaagtggaaccgcagcgagca
gaacaagcccaactacaagagcgccaaacgcagctccagcagcaattggaggcaacccaa
tcggccttagtaacggtgacagccgagctggagacggagacagaacaggcggaaggcgat
cgcgccgctctcagccaagcggaagcggcggtggtcacggcagcagatcagcttgtgcgg
ctggaagaagaactgcagatccagcaggaaacccgcgatcgcctgctcaaagaacaacga
gacaagcagcgccagctcgatcgccaagagagtttgcgtcaagcgatgcaggaaacccag
gggacagcggcggcgcggctgattctcgatactggcctgcccggagtgcatggtctagtg
gcgcaactgggacgggtggaaccccgctatcaactggcgctagaagtggccgccggtgga
cggctgggctatctggttgtcgatgatgatggcgtcgcctcggcgggaattgagctgctc
aaacagaagaaagcggggcgaatcacgttcctacccctcaaccggattcgtgcgggcaaa
cagccagaaattccgcgttggcagcagccggaagggttggtcgatcttgcgatcgcccta
gtcgactgcgacgatcgctaccgcgaagtcttcaaatttgtccttggcggcactgtcgtc
tttgaacggcttgatcaagcccgtcgctacatggggcagtaccgcatcgttaccctcgat
ggtgagctgctggaaaccagtggggcgatgaccggcggtagcatcgctcggcgatcaggc
ggcctcagcttcggtagtcccgacagtggcgaatcggcggaagtgcgagcaattcgcgat
cgcctcgaacaactcgaagtcatcctcgatcgcagtgagttgcaaatcctcaatctgcaa
gcggcgattaaagatgcagccagtacgctcagcgatcgccgccaacaacagcgcgagcag
caactgacggttcaacaacgtcagcaaaccctgcagcgcctgcagcaacaacagcaacag
ctcaacgctgaactgcagcaacgccaacagcaagccagtcaagcgcaagcacggctggca
gccttggctttggaattgcccgccgcactgaaacagctgaaaacactccgccaagccctt
gcggaactagaagattctccgattcatggtgagtggcagcagcggcaaacgcttctacaa
cagcaagaagccctgctccagcaacaggaaactgccctgcggcaagccgagcaacagctg
cagcaattgcagactgatcaaaaacgcctgcaggaacgcgcgatcgcagctcgaacccaa
gtcagccagctccggcaacagcagggggaacagctcaatcgtctggctcagctcgatgaa
cagcaacgccaacaggcgacggcgatcgcccaactgcagcaacgccaagcccaactagaa
gcccaactcgggcaagagaaagtcgatcgcgatcgcactgaacgccaactgcaagaacag
cgatcgcagcgacaaaacctcgtctggcagcaagaaaaacgccagcaacaacaacaggaa
ctccaacagcagctgaccgatctcgaagtccaacttcaggcggagcagcaggaattgccg
caacccctgcccgatattcccgaaatggtgcagcaacagggcatcgaagcactgcagcat
gaattgcgatcgctggcgaagcggattcaggcgatggagccggtcaacatgctggcgctg
gaggaatacgagcgcacccaagcgcgactggaggagctgtcagagaagctaacgacaatt
gaagcggagcgaacggaattactgctgcgcatcgaaaatttcacgactctgcgccgccga
gccttcatggagtcgtttgaggcgatcgatcgcaacttccaagagatctttgcgcacctg
tcggacggggatggctcgctccaactcgacaatcctgaagatccctttagcagcggcctc
aacctgattgcccatcccaagggcaagccggtgcgtcgtctagcctcgatgtcgggtggt
gaaaagtcgctgactgccctcagtttcatctttgccctgcagcgctaccggccctccccc
ttttatgcactggatgaggtagacagctttttggatggggcgaacgtcgaacggctggcg
cgggtgattcgtcagcaagcgcaagcagcccaattcatcgtggtcagccatcgccgaccg
atgattgaagcggcggagcgcacaattggcgtcacccaagctcgtggcgctcacacccaa
gttctggggatcccacaaccctag
DBGET
integrated database retrieval system
