Synechococcus elongatus PCC6301: syc2084_d
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Entry
syc2084_d CDS
T00163
Symbol
ycf56
Name
(GenBank) hypothetical protein YCF56
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
syc
Synechococcus elongatus PCC6301
Brite
KEGG Orthology (KO) [BR:
syc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syc03016
]
syc2084_d (ycf56)
Enzymes [BR:
syc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
syc2084_d (ycf56)
Transfer RNA biogenesis [BR:
syc03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
syc2084_d (ycf56)
Prokaryotic type
syc2084_d (ycf56)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
baeRF_family10
Motif
Other DBs
NCBI-ProteinID:
BAD80274
UniProt:
A0A0H3K4T0
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All DBs
Position
2235639..2236820
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AA seq
393 aa
AA seq
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MQVTFLGTSSGVPTRSRNVSAVALRLPQRAEVWLFDCGEGTQHQFLRSELRISQLRRIFV
THMHGDHVFGLMGLLASVGLAGNPERIDLYGPKPLRDYLQACAQHSRTHINYPLQIATVQ
PGVIYEDAEIVVSCAPLHHRVPAFGYRIQERDRPGRFDVEKARSLGIPPGPIYKQLKDGE
TVTLEDGRQIDGRQLCGPTERGRSMVYCTDTIFCESAIALAQDADVLIHESTFSDRDREM
AEQRLHATATMAAEVAKQAGVRQLILTHFSPRYAPGNEQTLDDLLAEAQAIFPQTMLAKD
FLSYDVPRRLAADADEPTEVPAVAKSPSQPEPSAIVPDSRRKPQITKEVLVARFSGEGEP
AHRAAYRYLRETCGVTPKGRSWEAVLAAFNSLD
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
ttgcaggtcacttttcttggtacgagttccggcgtacccacgcgatcgcgcaatgtctcg
gccgttgcactgcgcttgccccagcgtgccgaggtctggctgtttgactgtggcgagggc
acacagcatcaatttctgcggagtgaactgcggatcagtcagctacggcgcatcttcgtc
acccacatgcacggcgatcatgtcttcggtttgatggggttgttggccagtgtgggtttg
gcgggaaatccagagcgcatcgacctctatggtcccaagcccctgcgtgattatttgcag
gcctgcgcccagcattcgcgcacccatatcaactatccgttgcagattgcgacggtgcag
ccgggagtgatctacgaagatgcagagatcgttgtcagttgtgcgcccttgcatcaccgt
gtgccggcctttggctaccgcattcaagagcgcgatcgccccggtcggtttgatgttgag
aaagcacgatcgctgggcattccgccagggccaatttacaagcaactgaaggatggcgag
acggtcactctagaagatggtcgccagattgacggtcggcagctctgcggcccaacagag
cgcggccgtagcatggtctattgcaccgacacgattttctgtgagtcagcgatcgcactg
gctcaggatgccgatgtcctgattcacgagtcgaccttttccgatcgcgatcgcgagatg
gctgagcagcgcttgcatgcgacggcgacaatggcagcagaggtcgccaaacaagcgggt
gtccggcagttgatcctcacccacttcagcccgcgttatgccccaggcaatgagcagacc
ctcgatgatttgctcgcggaagcccaggccattttcccgcagacgatgctggccaaggat
ttcctcagctacgatgtgccccgccgtctagctgcagatgcagatgagccgacggaagtt
ccagccgtcgctaaaagcccgagtcagccagagcccagcgcgatcgttcctgactcgcgg
cggaagcctcaaattaccaaggaagtgttggtggctcgcttcagtggagaaggagaacca
gcccatcgtgccgcctatcgctacctgcgggaaacctgcggtgtgacccctaaagggcgg
agctgggaggctgtgctggcagccttcaacagcttggattag
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