Synechococcus elongatus PCC6301: syc2305_c
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Entry
syc2305_c CDS
T00163
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
syc
Synechococcus elongatus PCC6301
Brite
KEGG Orthology (KO) [BR:
syc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syc02000
]
syc2305_c
Transporters [BR:
syc02000
]
Other transporters
Pores ion channels [TC:
1
]
syc2305_c
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
BAD80495
UniProt:
A0A0H3K919
LinkDB
All DBs
Position
complement(2457141..2461847)
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AA seq
1568 aa
AA seq
DB search
MVASPEPHAPNPPSRRRAWWMLGGGLVLAGGVWVGLGGPQRLAETWLIPQAEQQLTAALG
QPIQLGNIEGWNWDGVRLGQSQLGTVSGPSFVSWQTTTVGIDWAGLFQGRLPLQLRLENV
DASLQQLSNGQWYTFPTQAQISEYPDLKLVVAGGKLSLQPRNTQNQLLVPIRLSAIAGHL
QLSQEQRARFQATAQLSTGQRGWVAGEIQGGRNGEIRLRSQQVALPEVQRLLAQTLRLPA
IAEAGTASGNLSLQLRDQQVTAINGSAQLQSATLKATEVPVRLQQVTAALQFQDRQITVQ
RGTARWQDWRIQGQGNWTFDQGGTIQLTTTASSSTARSPLPGLKLGGPLQAQLNIEQARE
AFRGAIVLTPAAGTTWQGLALGRATAQYQLDAKQLRVQQGAITIAQQGQLSLQGSVGRQA
SRPIAFTADLRGLSSRQLLQNLGAAVPTELELGSLIASGQIRGTLDRPEAEVRWQTTAQQ
QTVNGQIFLNRQPDWQAVALVQTGRGAIQARLTSQGDRWQGDVQVRDLPLQLLTADLGGQ
ASGQIQLNGSLNALSLTTVQADSRLALTNLAWQGQRWADGQANLDWGWDGQQLALRQFAA
SGLIARGQVRPNATADQQLQIGLNIQQVALQTLPLPLPLQGNLGFQGRLVGRFQAPQLEG
DLQIRDVGWSAQRRRRDWLGNLRYNQQGLQVALSSSDGQLLAQTDRRFQLQNFRWQQSGG
VIEAKAQGSDLRWQADNFSIAGLNLPSDRGIPLVTSGRVSGEGRLNLQRGTGSGNLSVLR
PRLGYVRGDRLNAQFQLGDGWLTLTEATLARDNSLYSLQGRVQLAGTGQVSARLEAKQGN
PQELAWFLRSLQRSGFLAEQPEFADAAAIASVPGIDDTATSLYQQLQRLSQLQALQQQEQ
AQQPLPTLPTIRQLTGRFDGVATVGGSWRQGLTADFDFQGSNWVWGDYRADRVLLKGAVK
QNQIQLEPFELQTGATKLSFSGSFSDQTQGELFVEGLSLAGIQQFLRLPVEMQGSLGLSA
TLSGRLDNPQILGDLQLSNAIFNGTSIQAEQTGFNVRDGRLTFGFALIADDPEPVRVTGS
LPLELPFLASQPSDEVQLNLDISNNGLKFLSLLSRDQVQWQGGQGNVQLRLRGTLDAPIL
SGQARFENARLASPLFEQPLTNLTAQINFAQDRLRVETLSSNFNGGTLTAQGILPIAQLL
PASDPDREQPLTIALRDATIALPNLFTGKTEADLQILGSALEPAIAGDIRVNQANIQLPG
PDRLTNLASGDLGAPTLPVRFQQLKIALEEGVSVQSEPLFRFGATGDLTLDGPLGSTLSP
NGKLTLTSGQVNLFTSTFVLDRRQTSSVIFRPDLGLDPFLNVNLVASIPEFSGSTLQTGS
DRIVLPFQSDPSQSGFGRFQLVRVRAQVNTLASNLQSSIQLTSSPPRSERELLTLIGGGT
VNSLANSGGGTALLGLASQALLNNVQGFFNSALGERINIQLFPTVTEVPDRDVQSLAQVG
NTNTVLGLGGQIGFDITDDLSVSVLQVLTLGLPTQFNLRYEFTDSLSIRGTTDTAGNNRA
VLEFNQRF
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atggttgcttcgcccgagccccacgctcccaatcctccatcgcggcggcgcgcttggtgg
atgcttgggggtggcttggtgctagcgggcggcgtttgggtgggcctcggtggtccccag
cgtctggcagaaacttggttgattccccaggctgagcagcagttgaccgctgctttgggg
caaccgattcagcttgggaatatcgagggctggaactgggatggggtgcgcctagggcaa
tcgcagcttggtactgtctcaggcccgagttttgttagttggcagaccaccacagtcggg
atcgattgggctggcctcttccaaggtcgtctgcccttacagctgcgtctggaaaacgtt
gatgccagtctgcagcaactcagcaatggccagtggtataccttcccgacccaagctcaa
atcagtgaatatcccgacctcaagttagttgttgcgggcggaaaactcagtctccagccc
cgcaatacccagaatcaactgctggtccccatccgcctcagtgcgatcgccggtcatttg
caactgtcccaagagcagcgggctcggtttcaagccacggctcaattgagtaccggccag
cgtggctgggtggcaggcgagattcagggcggcaggaatggcgaaattcgcctgcgcagt
cagcaggtagccctgcccgaagtgcaacgcttgttagcccaaacgctgcggttgccagcg
atcgctgaggccggcaccgccagcggtaacctctctctgcagttgcgggaccaacaggtg
acggccatcaacggctcagcccagttgcagtcggcaaccctcaaggcaacagaagtcccc
gtgcgtttgcagcaagtgacggcagcgctgcagtttcaagatcgccagattacggttcaa
cgaggcactgcccgctggcaagactggcgaatccaaggacagggaaattggacgttcgat
cagggcggcacgattcagctgaccacaaccgccagcagctcgacggcgcgatcgcctttg
ccagggctcaaactgggtggccccctgcaagcacagctgaacattgagcaagcacgcgaa
gcgtttcggggcgcgattgtcctgacgccggccgccggcaccacgtggcagggcctcgcc
ctcggtcgggccactgcccaataccaactggacgctaagcaactgcgcgttcaacaagga
gcgatcacgatcgcccaacaggggcaactgtcacttcagggcagcgtcggacgccaagcc
agccgaccgatcgccttcaccgcagatctacggggtctctccagccgacagctgttgcaa
aacttaggagcggcggttcccaccgagctggaactgggatccctaatcgccagtggtcag
attcggggaaccctcgatcgccccgaggcagaagttcgctggcaaaccaccgcccagcag
caaaccgtcaacggccagatttttctcaaccgtcagcccgattggcaggccgttgcgcta
gttcaaacgggtcgtggtgcgattcaagcccggctcaccagtcagggcgatcgctggcag
ggtgatgtccaggtccgagatctgccgctgcaactactgacagcagacctaggtggccaa
gcgagcggtcaaatccagctgaacggcagtctgaacgcgttgtctctgaccaccgttcag
gccgacagtcgcctagccctgactaatctggcttggcagggtcagcgttgggccgatggt
caggccaacttggactggggctgggatgggcaacagctggcgctgcgccaattcgccgct
tccgggctcatcgcccgaggacaagtccggcccaatgccaccgccgatcaacagctccag
atcggcctgaatattcagcaggttgccctgcaaacgctgccgctgccactgccgctgcag
ggtaacttgggcttccaaggtaggctagtcggtcgcttccaagcgccacaactggagggc
gatctgcaaatccgcgatgtgggttggagtgctcagcgtcgacggcgcgattggctgggc
aatctgcgctacaaccagcagggcctgcaggtcgccttgagcagctccgatggacaactc
ctagcgcaaaccgatcgccgcttccagctacagaacttccgctggcaacagagtggcggc
gtgattgaagccaaagcccaaggttccgatctgcgctggcaggccgataacttcagcatt
gccggactgaacctaccgagcgatcgcggcattcccttggtgacctcggggcgagtcagt
ggcgagggtcgcctcaacctccagcggggcaccggcagcggcaatctctcggtgctgcgt
cctcgcctcggctatgtgcggggcgatcgcctgaacgctcagttccaactgggtgatggc
tggctgacgcttacagaagcaaccctggcacgggataacagcctctacagtttgcaaggc
cgagttcagttggctggtacgggtcaagtctcggcacgactcgaggctaaacagggcaac
ccacaagaattggcttggttcctgcgcagtctgcagcgatcgggctttttggcggaacaa
ccggagttcgcggatgctgcagcgatcgcctcggtacccggcatcgacgacacggccacc
tctctttaccaacagctgcagcgcctgagtcagctccaagcgttgcaacagcaagaacaa
gcacaacagccactgcccacacttcctactattcgccagctcacgggtcgctttgatggg
gtggcaaccgtgggtgggtcctggcgtcagggactgactgcagactttgacttccaaggt
agtaactgggtttggggagactatcgcgccgatcgcgtactactcaaaggggccgtcaaa
caaaaccaaatccaactggaaccctttgaactgcagactggcgcgaccaagctcagcttt
agcggcagcttcagcgaccaaactcaaggcgaactctttgtcgaagggttatcgctagcg
ggtattcaacaattcctgcgactgcccgttgaaatgcaaggcagcttgggactctcagcc
accctgtcaggccgcctcgataacccgcaaattttgggcgatctccagctgagcaatgcc
atcttcaatggcacatcgattcaggctgaacaaaccggctttaacgttcgcgacggtcgt
ctgacctttggttttgctctcattgccgatgatcctgaaccggtgcgagtgaccggcagt
ctgccccttgagttgccctttttggccagccaacccagcgacgaagttcagctcaacctc
gacatcagcaacaacggcctcaagttcttgagcctgctcagccgcgatcaggtgcagtgg
caggggggacaagggaatgtacaactgcggctgcggggcacccttgatgcccctatcctc
tcggggcaagcacgctttgaaaatgccaggttggcttcgccgctgtttgagcaaccgctg
acaaatctgacggcccagatcaattttgcgcaggaccgcctgcgggtcgagaccctgagc
agcaatttcaacggcggtacgctcacagcccaaggcatcctgccaattgctcaactcttg
cctgccagtgaccccgatcgcgaacagccactgaccatcgcgctccgcgacgccacgatc
gccttacccaacctgtttaccggcaagaccgaggcggatctacaaattctgggctctgcc
ctagaacccgcgatcgcgggagatatccgggtcaatcaagccaacattcagctgcctggc
cccgatcgcctcaccaacctcgccagtggcgatttgggtgctcccaccctgcctgtccgc
ttccaacagctcaagattgccttggaagaaggggtgtcggttcaatccgaaccgctgttt
cgctttggggcaacaggggatttgaccctcgatggcccactgggatccacgctgtcgccc
aatggcaagctgacgctaacgtctggacaggtaaatcttttcacctccacctttgtcctc
gatcgccggcagacaagcagcgtcattttccggccggacctcggtctcgatcccttcctc
aacgtcaacctagtcgcttcgatccccgaattcagtggatcgacgctacaaacagggagc
gatcgcatcgtcttgccgttccagagtgatccatcccagagtgggtttggccgcttccaa
ctggtgcgagtccgcgcccaagtcaacaccctcgccagcaacctccagagcagcatccag
ctcaccagcagcccgccccgtagtgaacgggagttgctgacgctgatcggtggcggcaca
gtcaatagcttggcgaattctggtggcggcacagctttgttagggctggccagtcaagcc
ttgctcaacaacgtccaaggcttcttcaacagtgcgctgggtgagcggatcaatattcag
ctcttcccaacggtgaccgaagttcccgatcgcgacgtccagtctctagcccaagtcggc
aacaccaacacagtcctcggactaggcggacagatcggctttgacatcaccgatgatctg
tcggtttcagtgctgcaagttttgacactgggcctgccaactcagttcaacctgcgctac
gaattcaccgatagcctcagcattcggggaacaaccgataccgctggcaacaatcgggcg
gttctagagttcaaccaacgcttttag
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