Synechococcus sp. CBW1107: I1E95_02345
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Entry
I1E95_02345 CDS
T11802
Name
(GenBank) DEAD/DEAH box helicase
Organism
sycb Synechococcus sp. CBW1107
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Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
Cas3-like_C_2
AAA_22
CMS1
B12-binding
Peripla_BP_1
P-loop_SecA
Flavi_DEAD
DEDD_Tnp_IS110
Motif
Other DBs
NCBI-ProteinID:
QPN57035
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Position
453768..455693
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AA seq
641 aa
AA seq
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MTQFNAGESFACSIDLSAHPAQAPIPPIASDPITSNQPSCVDLSALEGQPSAAETTAVES
TLIGPIDQPGEATQDAPAGAFAAFGLGAEILAAVADCGYSDPSPIQKAAIPELMLGRDLV
GQAQTGTGKTAAFALPLLARLDPQQRTPQVLVLTPTRELALQVAEAFNGYAAKLPQVRVL
PIYGGADFRDQIVRLKRGVQIVVGTPGRVMDHMRQGTLDLSGLRCLVLDEADEMLRMGFI
DDVEWVLEQLPEKRQVVLFSATMPSEIRRLSRKYLKDPAEVTIQQKGAENSTIRQRHLVV
HGAQKLEALTRVLEAESSEGVIIFARTKAITLTVSEALEQQGYDVAVLNGDVPQNQRERT
VERLRSGQVNVLVATDVAARGLDVDRITLVINYDIPFDSEAYVHRIGRTGRAGRQGDAIL
FLTPRERRFLGGLERAVGKAITPMEVPTNADINQSRLDRLRERLTALVATPRSDDQELAL
LSEILQRVGSEISASPEQLALAALQLAVGDRPLLVQGAETWRQPTTAGRDRQRSGDDDRR
GDRRSPSRTGGGGRLDASAPPDADMERFRIEVGWQDRVKPGNIVGAIANEAGLNGRSIGR
IQIFDTHSTVDLPSGMPEDVFNALRRLRVMNKELQITRHHS
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
gtgacccagttcaacgcaggcgagagctttgcgtgctccatcgacctgagcgcccatccc
gcccaagcccccatcccacccatcgcgagcgatcccatcacttccaatcaacccagctgt
gtcgacctgagtgccctcgaagggcagccgtcagccgccgagaccacggcggtcgagtcg
accctgatcggcccgattgaccagcccggcgaagccactcaggacgctcccgccggagcc
ttcgccgcgtttggcctgggggctgagatcctcgccgccgtggcggattgcggctacagc
gatccctctcccattcagaaggccgccattcccgagctgatgctcggccgcgacctggtg
ggccaggctcagaccggcaccggcaagacggccgccttcgctctgcccctgctggcgcgc
ctcgatccccagcagcgcacaccgcaggtgctggtgctgacccccacccgtgaactggct
cttcaggtggctgaagccttcaacggctatgccgccaagctcccccaggtgcgtgtgctg
ccgatctacggcggtgccgatttccgcgaccagatcgttcgcctcaagcgcggcgtgcag
atcgtggtggggaccccgggcagggtgatggaccacatgcgccagggcactctcgacctc
tccggactgcgctgtctggtgcttgatgaagcagacgagatgctgcgcatgggcttcatc
gatgatgtcgagtgggtgcttgaacaactccccgagaagcggcaggtggtgctcttctcc
gccaccatgccttcggagatccgccggctctcgcgcaagtacctgaaggaccccgctgag
gtcaccatccagcagaagggtgctgagaacagcaccatccgccagcgtcacctggtggtg
cacggcgcccagaaactggaggccctcacccgtgtgctggaagcggagagcagcgaggga
gtgatcatcttcgcccgcaccaaggcgatcactctcaccgtctccgaagccctggaacag
cagggttacgacgtggccgtgctcaacggtgacgttccccagaaccagcgggagcgcacg
gttgagcggctgcgcagcggacaggtgaacgtgctcgtggccaccgacgtcgccgcccgg
gggctggatgtggaccggatcaccctggtgatcaactacgacatccccttcgacagcgag
gcgtatgtccaccgcatcggccgcaccggccgggcgggccgccagggggacgcgatcctc
ttcctcacgccccgggagcgccgtttcctgggtggtctggagcgcgctgtcggcaaggcc
atcacaccgatggaggtgcccaccaacgccgacatcaatcaaagccggctggatcgcctg
cgcgagcgcctcaccgccctggtggcaaccccccgctctgacgatcaggaactggccctg
ctcagcgaaatcctgcagcgggtgggcagcgagatcagcgccagccccgagcaactggcc
ctggccgcgctgcaactggctgtgggcgaccgccccttgctggttcagggggctgaaacc
tggcgccagcccaccaccgccggccgggaccgtcagcgcagcggcgacgacgaccgccgc
ggtgatcgccgctcaccctcccgcactggcggcggcgggcgcctggacgcctccgctccc
ccggatgccgacatggagcgtttccggatcgaggtgggctggcaggaccgggtcaagccc
ggaaacattgtcggagcgatcgccaacgaagccggtctgaacggccgcagcatcggccgc
atccagatcttcgacacgcacagcaccgtcgatcttcccagtgggatgcccgaggatgtc
ttcaacgccctgcggcggctgcgggtgatgaacaaagagcttcagatcacccgccaccac
tcctga
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