Synechococcus sp. CC9605: Syncc9605_0087
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Entry
Syncc9605_0087 CDS
T00292
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
syd
Synechococcus sp. CC9605
Brite
KEGG Orthology (KO) [BR:
syd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syd03032
]
Syncc9605_0087
03400 DNA repair and recombination proteins [BR:
syd03400
]
Syncc9605_0087
Enzymes [BR:
syd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Syncc9605_0087
DNA replication proteins [BR:
syd03032
]
Prokaryotic type
DNA Topoisomerases
Syncc9605_0087
DNA repair and recombination proteins [BR:
syd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Syncc9605_0087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
DUF6507
TOPRIM_C
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ABB33866
LinkDB
All DBs
Position
88692..90659
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AA seq
655 aa
AA seq
DB search
MSDASKVQNAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGH
CDRIVVVLGEDGSASVSDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFGAGGYKVSGGL
HGVGVSVVNALSEWVQVTVRRQGQVHRQRFERGAAIGVLASESQPAAESGETGTTVCFKP
DLEIFTGGIVFDYATLSARLRELAYLNGGVRIVFRDERESARDGEGNPHEETYFYEGGIK
EYVAYMNKEKDALHPDIIYVNSEKDGVQVEAALQWCSDAYSDSILGFANNIRTVDGGTHI
EGLKTVLTRTLNAFAKKLGKRKESDSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGN
TEVRGIVDNLVGEALSQFLEFNPSVIGLILEKAIQAFNAAEAARRARELVRRKSVLESST
LPGKLADCSSRDPGESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIY
KNTEIQALITALGLGIKGEDFDVKNLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQKELV
EGGYIYIACPPLYKVERGKNHTYCYNEGDLQKTLEGFGEKANYTIQRFKGLGEMMPKQLW
ETTMDPTTRTMKRVEIEDALEADRIFTILMGDKVAPRREFIETHSAELDMAALDI
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgcttccaaggtccagaacgcctacggcgccgagcagattcaggtgctggag
gggcttgagcccgtccgcaagcgcccaggcatgtacatcggctccaccgggccgcggggt
ttgcaccacctggtgtacgaggttgttgataactcggtggatgaagccctggcgggccat
tgcgaccgcatcgttgtggtcctcggtgaagacggctccgcctcagtgagcgataacggc
cgcggcattcccaccgatgtgcacccccgcaccggcaagagcgccttggagacagtcctc
acggtgctgcacgccggcggaaaatttggcgccggtggttacaaggtttctggcggcctc
cacggcgttggcgtttcggtggtgaacgccctgagcgaatgggtgcaggtgacggtgcga
aggcagggccaggtgcatcgccagcgttttgagcgcggcgctgccatcggggtgctggcg
tcggagtcgcagcctgcagctgaatccggtgagaccggcaccaccgtctgcttcaagccc
gaccttgaaatcttcaccggcggcatcgtcttcgactacgccactctttcggcccgtttg
agggagctggcttatctgaacggcggcgtgaggattgtcttccgcgatgagcgggagtca
gcccgggatggggaaggcaatccccatgaggagacttacttctacgaaggcggcatcaag
gaatacgtcgcctacatgaacaaggagaaggacgcccttcatccggacatcatttacgtg
aattccgagaaggatggcgtccaagtggaggcagccctgcagtggtgctccgatgcctat
tccgacagcatccttggcttcgccaacaacatccgcaccgtggatggcggcacccacatt
gaaggcttgaagacggtgctcacccgcaccctcaacgccttcgccaagaagctgggcaaa
cgcaaggaatcagattccaatcttgcgggggagaacatccgtgaaggcctgacggcagtg
ctctcggtgaaggtgccggaaccggaattcgaaggtcaaaccaagaccaaactcggcaac
accgaggtgcggggcatcgtcgacaacctggtgggagaggccctcagtcagttcctcgag
ttcaatccctccgtcatcggcctgatcctcgagaaggcgatccaggcgtttaacgccgct
gaggccgcccgccgggcaagggaactggtgcggcgcaagagcgtgctggagagctcaacc
ctgcccggaaaacttgctgattgcagctctcgcgatcccggcgaatccgagatctacatc
gtggagggcgactccgccggtggctcggccaagcagggccgggaccgtcgcttccaggcg
atcctgccgctacggggcaagattctcaacatcgagaaaacagacgacgccaagatctac
aagaacaccgagattcaggcgttgatcaccgctttgggtctggggatcaagggtgaggac
ttcgatgtgaagaacctccgttaccaccgggtcgtgatcatgaccgacgccgacgtggac
ggcgcccatatacgcaccctgctgctcaccttcttctaccgctatcagaaggagctggtg
gaaggcggttatatctacatcgcctgtccgccgctctacaaagttgagcgcggcaagaac
cacacctattgctacaacgaaggagatctgcagaagaccctggagggcttcggcgagaag
gccaattacacgatccagcgcttcaagggtcttggcgaaatgatgcccaagcagctctgg
gaaaccaccatggatcccaccacgcgcacgatgaagcgggtggagatcgaagatgccctc
gaggctgatcgcatcttcacgatcctgatgggcgacaaggtggcgccccgccgggaattc
atcgagacccacagcgcagagctggatatggcggctctcgacatttga
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