Synechococcus sp. CC9605: Syncc9605_0093
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Entry
Syncc9605_0093 CDS
T00292
Name
(GenBank) type II alternative RNA polymerase sigma factor, sigma-70 family
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
syd
Synechococcus sp. CC9605
Brite
KEGG Orthology (KO) [BR:
syd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syd03021
]
Syncc9605_0093
Transcription machinery [BR:
syd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Syncc9605_0093
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Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r1_2
Sigma70_r4
PglZ
HNH_repeat
Motif
Other DBs
NCBI-ProteinID:
ABB33872
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Position
93773..94780
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AA seq
335 aa
AA seq
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MAPAATAASKPKTSVKTAKAVTADVDLVRSYLRDIGRVPLLTHEQEITLGRQVQELMDLE
SLESELKSKAGEKPSRDQLAKASGLSSIQLKRKLQHGRRAKERMVAANLRLVVSVAKKYT
KRNMELLDLIQEGTIGLVRGVEKFDPTRGYKFSTYAYWWIRQGITRAIAEKSRTIRLPIH
ITEMLNKLKKGQRELSQELGRTPTVTELAEFVELPEDDVKDLMCRARQPVSLEMKVGDGD
DTELLELLSGDGDLPSDQVEEDCLKGDLRSLLGQLPHLQEQVLRMRYGMDGEDPMSLTGI
GRILGMSRDRVRNLERDGLAGLRRVSDQVEAYVAC
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggctccggctgcgaccgctgcttccaagcccaaaacctctgtgaagacggcaaaagcc
gtcacggctgacgttgatctggttcgttcctatctgcgagacattggccgtgtgcccctt
ctgacccacgagcaggagatcaccctgggacggcaagtccaggaactgatggatttggag
tcactcgagtctgagctgaagagcaaggccggtgagaagcccagtcgcgaccagcttgcc
aaggcctcaggtctgtcctcgatacagctgaagcgcaagcttcagcacggtcgccgcgcc
aaggagcggatggtggctgccaatctccgacttgtggttagcgttgcaaagaaatacacc
aaacggaacatggaactcctggacctgatccaggaaggaaccatcggtttggtgcgcggc
gtcgagaagtttgatcccacccgcggttacaagttctccacctacgcctattggtggatt
cgtcaggggattacacgggctatcgcggaaaagagccgcacgatccggcttccgatccac
atcaccgagatgctgaacaagctcaagaagggtcagcgagagctgagccaggagctggga
cgcacacccaccgtcaccgagttggctgagttcgttgagctgcctgaggacgacgtcaag
gatctgatgtgccgtgcccgtcagcccgtcagtcttgaaatgaaggttggtgatggtgac
gacactgaacttcttgaattgctttccggagatggcgatttgcctagcgatcaagtggaa
gaggactgcttgaagggtgatctccgcagcctgttggggcaattgcctcacttgcaggag
caggtgttgcgcatgcgttacggcatggatggggaagatccgatgagcctcacgggaatc
ggtcggatcctgggcatgagccgcgaccgtgttcgcaacctcgagcgcgatggtttggcc
ggtctgcgccgggttagtgatcaggtggaggcctacgtcgcctgctga
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