Synechococcus sp. CC9605: Syncc9605_0139
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Entry
Syncc9605_0139 CDS
T00292
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
syd
Synechococcus sp. CC9605
Pathway
syd00541
Biosynthesis of various nucleotide sugars
syd01100
Metabolic pathways
syd01250
Biosynthesis of nucleotide sugars
Module
syd_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
syd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Syncc9605_0139
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
syd01005
]
Syncc9605_0139
Enzymes [BR:
syd01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
Syncc9605_0139
Lipopolysaccharide biosynthesis proteins [BR:
syd01005
]
Lipid A
Syncc9605_0139
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
ABB33915
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Position
complement(135673..136521)
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AA seq
282 aa
AA seq
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MAHQIQLGDITFANDRPFALLGGVNVLEDLDFALRCAGHYKNVCGRLNIPLVFKASYDKA
NRSSIHSFRGPGLNEGLQILQAVKDTHGIPVITDVHSPEEAAAAAKVADIIQLPAFLARQ
TDLVRAMAETGAMINVKKPQFLSPEQMRNIVDKFRECGNENLLLCERGTNFGYDNLVVDM
LGFGVMKRTCDDLPLIFDVTHALQCRDPGGAASGGRRSQVVDLARSGMAVGLAGLFLEAH
PDPARARCDGPSALPLDQLEPFLTQVKAIDDLVKAMPDLQIN
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcatcagatccaactgggagatatcaccttcgcgaacgaccgccccttcgccctg
ctgggtggtgtgaacgttctcgaggatctcgacttcgccctgcgttgcgccggccactac
aaaaacgtctgcggaaggctgaacatcccattggtgttcaaggcgtcgtacgacaaggcc
aaccgctcctccattcattccttccgtggccccggcctcaacgaagggctgcagatcctc
caggcggtgaaggacacccatggcattccggtgattacggatgtgcacagccctgaagag
gccgctgccgcagccaaggtcgccgacatcatccagctgccggcttttctggccaggcag
accgatctggtccgtgccatggcggaaaccggtgcgatgatcaacgtcaagaagccacag
ttcctgagtccggaacagatgcgcaacatcgtggacaaattccgcgaatgcgggaacgag
aacctgctgctgtgtgagcggggcaccaacttcggttacgacaatctcgtggtggacatg
ctggggttcggcgtgatgaaacgcacctgcgatgaccttccgctgatcttcgatgtcacc
cacgccctgcagtgcagggatccaggtggtgctgcctccggcggacgtcgcagccaggtg
gtggacctagcccgctctggcatggcggttggcctggctggtttgttcctggaagcacac
ccagacccggcgcgagcccgttgcgacggccccagcgccttaccccttgatcagctggaa
ccttttctcacgcaggtgaaagccatcgatgatctggtgaaggccatgccagacctgcag
atcaactga
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