Synechococcus sp. CC9605: Syncc9605_0597
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Entry
Syncc9605_0597 CDS
T00292
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
syd
Synechococcus sp. CC9605
Brite
KEGG Orthology (KO) [BR:
syd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syd03032
]
Syncc9605_0597
03400 DNA repair and recombination proteins [BR:
syd03400
]
Syncc9605_0597
Enzymes [BR:
syd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Syncc9605_0597
DNA replication proteins [BR:
syd03032
]
Prokaryotic type
DNA Topoisomerases
Syncc9605_0597
DNA repair and recombination proteins [BR:
syd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Syncc9605_0597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ABB34371
LinkDB
All DBs
Position
577798..580497
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AA seq
899 aa
AA seq
DB search
MAHTLVIVESPTKAKTIRGFLPKGFKVEASMGHVRDLPNNASEIPASAKGQKWANLGVNI
EADFEPLYVVPKDKKKTVRELKDALKGADQLLLATDEDREGESISWHLLQLLAPKVPVKR
MVFHEITKEAIGKALDQTRDLDMELVHAQETRRVLDRLVGYTLSPLLWKKVAWGLSAGRV
QSVAVRLLVQRERARRAFRSGSYWDLKAQLEQSGSAFEAKLTHVGGQRIATGNDFDESTG
GLKAGSAVRLLSESEAKALAESVRSSAWTVDAVEEKPTVRKPVPPFTTSTLQQEANRKLR
LSARETMRCAQGLYERGFITYMRTDSVHLSDQAINASRNCVETLYGKEYLSKGPRQFSTK
ARNAQEAHEAIRPSGESFRTPGETGLDGRDLAVYELIWKRTVASQMAEARLTMLSVDLSS
GEASFRASGKRIDFPGFFRAYVEGSDDPDAALEGQEVLLPALSVGDAPEPKTVEPLGHQT
QPPARFSEASLVKMLEKEGIGRPSTYASIIGTIVDRGYATLLGNALTPSFTAFAVTALLE
EHFPELVDTSFTARMENTLDEISHGKVQWLPYLEGFYKGDEGLENQVQQREGDIDPGASR
TIDLEGLSSVVRIGRFGAYLEAKRVSDDGEEELIKATLPREITPADLDEEQAELILKQKA
DGPEAIGEDPETGDLVYLLSGQYGPYVQRGQVSDENPKPKRASLPKGQKPEDLTLEDALG
LLRLPRLLGEHPEGGRIQAGLGRFGPYVVWDKGKGDKDYRSLKGDDDVLAVGLSRAIELL
AMPKRGRGGRTALKDLGKPEGSDETIQVYDGPYGLYVKQGKVNASLPEGKGADDVTLEEA
VELLVAKAASKKGGRKTAAKKPAAKKPAAKKPAAKKPPATTKTGRLRASAVRVIKPADN
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcacaccctcgtcatcgttgagagccccacgaaggccaagaccatccgtggcttc
cttcccaagggattcaaggtcgaagcctccatggggcatgtccgtgaccttcccaacaac
gccagcgagattccggcatcagccaaggggcagaaatgggccaacctcggtgtgaacatc
gaagcggatttcgagccgctttacgtagtcccgaaggacaagaagaaaacggttcgcgaa
ctcaaggacgccctcaagggtgctgatcagttgctgttggcgacggacgaagaccgggag
ggtgaaagcatcagttggcatctgctccagctgctggcgccgaaggtgccggtgaagcgc
atggtgtttcacgagatcaccaaggaggccatcggcaaggccctggatcagacccgcgat
ctggacatggagctggtccatgcccaggaaacccggcgcgttttggatcgccttgtgggg
tacaccctgtcccctctcctctggaaaaaggtggcctggggactctccgccgggcgggtg
cagtccgttgcggttcgtctcctggttcaacgggaacgggcccgccgcgccttccgcagc
ggcagctactgggacctcaaggcccagcttgaacagtcgggcagtgcctttgaggccaag
ctcacccatgtgggtggccagcgaatcgccaccggcaacgatttcgacgagagcaccggc
gggctgaaggcgggcagtgctgtgcggctgctcagcgagagcgaggccaaggcgttggct
gaatccgtgcgatccagcgcctggactgtggatgcggtggaggagaagcccaccgtgcgc
aagccggtgcctcccttcaccaccagcaccctccaacaggaggcgaatcgcaagctgcgc
ctctcagcccgggaaaccatgcgctgtgcccaggggctctatgaacgcggtttcatcacc
tacatgcggaccgactcggttcacttgtcggatcaggcgatcaacgcatcccgcaactgc
gtggagaccctctacggcaaggagtatctgagcaaagggccgcggcagttcagcaccaaa
gcccgcaatgcccaggaggcccatgaagcgattcgtccatcgggcgaaagcttccgaacc
cccggtgagaccggacttgatgggcgagatctggcggtctacgagctgatttggaagcgc
accgtggccagccagatggctgaagccaggctcaccatgctgtcggtagatctcagctca
ggtgaggccagtttccgggccagcggcaagcgcatcgacttccccggtttcttccgcgcc
tacgtggagggcagtgatgatcccgacgcggccctcgagggtcaggaagtgctgctgccg
gcgttgagcgttggcgatgcaccggagccgaagaccgttgagcccctcggccatcaaacc
cagcccccggcacgcttcagtgaggcatcgctggtgaagatgctggaaaaggaaggaatc
ggccggccgtcgacctacgcctcgatcattggaacgatcgtggatcgcggctacgccacg
ctgctgggtaatgccctgacccccagcttcaccgcctttgcggtgacggcgctgctcgag
gagcatttccctgaactggttgacaccagcttcaccgcccggatggagaacacccttgat
gagatctcccacggcaaggtgcagtggctgccgtacctcgagggcttctacaagggtgac
gagggtcttgaaaaccaggtgcagcagcgggagggagacatcgatcccggtgcatcccgc
accatcgatctggagggcttgtcctccgtggttcgtatcggccggtttggcgcttacctg
gaggccaaacgggtcagcgacgacggtgaggaagagctgatcaaggccaccttgccccgg
gagatcactccggctgatctggatgaagagcaggccgaactgattctcaaacagaaggcc
gacggccccgaagccatcggtgaggatccggaaacgggggatttggtctacctgctctcc
ggtcagtacggcccttatgtgcagcgggggcaggtgagtgatgagaatcccaagcccaaa
cgcgcgtctctgcccaaggggcagaagcccgaagatctcaccctggaggatgccctcgga
ctgctccgcttgccgcgtcttctcggcgaacatcccgaaggtggtcgcattcaggcgggg
ctgggtcgctttggcccctatgtcgtctgggacaagggcaagggcgataaggattaccga
tcgctcaagggggatgacgatgttctggcggtggggctgagccgagccatcgagctgctg
gccatgcccaaacggggtcggggtggacgcaccgccctaaaggatctcggtaagccggag
ggcagtgatgaaacgattcaggtctatgacggcccctacggcctgtacgtcaaacagggc
aaggtgaatgcctccctgccggaaggcaagggtgctgacgatgtgacccttgaggaggcg
gtggaacttcttgtcgccaaggcagcatcgaagaagggcggtcgtaaaaccgctgcgaaa
aaaccggcggccaagaagccagctgccaaaaaaccagccgccaagaaacctcctgccacc
accaagaccggtcggctcagggccagtgcggtgcgggtgatcaagccggctgacaattga
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