Synechococcus sp. CC9605: Syncc9605_1142
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Entry
Syncc9605_1142 CDS
T00292
Name
(GenBank) Exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
syd
Synechococcus sp. CC9605
Pathway
syd03030
DNA replication
syd03430
Mismatch repair
syd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Syncc9605_1142
03430 Mismatch repair
Syncc9605_1142
03440 Homologous recombination
Syncc9605_1142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syd03032
]
Syncc9605_1142
03400 DNA repair and recombination proteins [BR:
syd03400
]
Syncc9605_1142
Enzymes [BR:
syd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Syncc9605_1142
DNA replication proteins [BR:
syd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Syncc9605_1142
DNA repair and recombination proteins [BR:
syd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Syncc9605_1142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ABB34897
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All DBs
Position
1073750..1074592
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AA seq
280 aa
AA seq
DB search
MPEQLDLLAGFSRPQAEPQTAASPMPASPAVDPEAKDDQHEDAPKASPTTLLIIDTETSG
LDPQQDQCLELGCILFDVPSRSVLAQQSFLLPVDSNAAEPINRIPAAVTRRPQPWREALV
WFEHLLDAADLLVAHNAAFDRQWFGLGVVPATATPWLCTMDDIRWPAERQLRLRPSVRDL
ALAYGVPVWAAHRALSDCIYIADVFARCDDLEHLLKRGLEPRQLMRARVSFDERHLAKAA
GFHWNDPIKGAWTRRLSAREVAELEFPVAPVELEADRLSA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacagctcgatttgcttgcggggttttcaaggcctcaggcggagccccaaaca
gccgcatcgccgatgccagcttcgccagctgttgaccctgaggccaaggatgatcagcac
gaggatgcgccaaaggcctcccccaccacccttctgatcattgacaccgagacctccggt
ttggatccgcagcaggaccaatgccttgagctgggctgcattttgtttgatgtgccgagt
cgttcggtgctggcccagcaatcgtttctcctcccggtggactccaacgcagcagaaccg
atcaaccggatccccgccgccgtcacccgccgcccccagccctggcgggaggcgttggtg
tggtttgagcatctgctggacgctgctgatctgctggtggcccacaacgcggccttcgat
cgccagtggttcggtctgggtgtggtgccggccaccgcaacaccgtggctctgcaccatg
gacgacatccgctggccggcggagcgtcagttgcgtttgcggccgtcggtgcgggacctt
gccctggcctacggcgttcccgtctgggcggcccaccgcgccctcagcgattgcatctac
atcgcggatgttttcgcccgctgtgacgacttggagcatttgttgaaacggggcctggaa
ccccgccagttgatgcgtgcccgggtgtcgttcgatgaacgccatttggcgaaagcagcg
gggttccattggaacgatccgatcaagggggcctggacccggcgtttgagtgcccgtgag
gtggcggagcttgagtttccggtcgcgcctgttgagctcgaagccgatcgcctcagtgcc
tga
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