Synechococcus sp. CC9605: Syncc9605_1288
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Entry
Syncc9605_1288 CDS
T00292
Name
(GenBank) DNA-directed RNA polymerase specialized sigma subunit-like
KO
K03090
RNA polymerase sigma-B factor
Organism
syd
Synechococcus sp. CC9605
Brite
KEGG Orthology (KO) [BR:
syd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syd03021
]
Syncc9605_1288
Transcription machinery [BR:
syd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Syncc9605_1288
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Motif
Other DBs
NCBI-ProteinID:
ABB35042
LinkDB
All DBs
Position
complement(1202581..1203132)
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AA seq
183 aa
AA seq
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MNSWISSTDPLISQRHLRHESRRVLPPYIARRNQQALEHLGLAHCAARRQQQRGPEEFDD
LLQESRVGLIRGVDRFDPQRRVKPSSYLLSRATGQILHYRRDRSRMIKVHGGCVLYAAGM
KIQREREQNTQPSLSDLELATALSVLPERWSEAVKSHGVSQVVDLSASPLEPTQACEVDE
HLD
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
ttgaacagttggatcagtagcactgatcccttgatttctcaacgccacctgcggcacgag
tctcgccgtgtactgccgccctacattgcacggcgcaatcaacaagctctcgaacaccta
ggcctggcccactgcgcggcccgtcggcaacagcaacgcgggcctgaggagttcgacgat
ctgctgcaggagtcccgggttggattgatccgtggcgtggatcggtttgatccgcagcga
cgggtgaaacccagcagctatctgctgtcgcgggctaccggtcaaatcctccactaccga
cgcgatcgatcacgcatgattaaagttcatggaggctgcgtcctctacgcagctgggatg
aagattcagcgcgaacgcgaacagaacacccaaccgagtctcagcgatctcgaactcgcc
acagcactctcagttctcccggagcggtggtccgaggccgtgaagagccatggggtcagc
caggtcgtcgacctgagtgccagccctctggaaccaacacaagcttgtgaggtcgacgaa
cacctggactag
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