KEGG   Synechococcus sp. CC9605: Syncc9605_1463
Entry
Syncc9605_1463    CDS       T00292                                 
Name
(GenBank) DEAD/DEAH box helicase-like
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
syd  Synechococcus sp. CC9605
Brite
KEGG Orthology (KO) [BR:syd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:syd03400]
    Syncc9605_1463
Enzymes [BR:syd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Syncc9605_1463
    5.6.2.6  RNA 3'-5' helicase
     Syncc9605_1463
DNA repair and recombination proteins [BR:syd03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Syncc9605_1463
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: ABB35217
LinkDB
Position
1371637..1374132
AA seq 831 aa
MAASKAKAKAKAKPTTNDPRLNPIHAWFAQRNWTPLPFQQETWNAYLAGRNGLIQVPTGS
GKTFAAVMGPMARMLAEEQPLKGIRLVYITPLRALSRDLSLAIREPIEAMGWPIRVGIRN
GDSSSSERTKQLKAPPQILVTTPESLALLLSNAKAEELFGQLETVILDEWHELMGSKRGS
QTELCLSWLRQLRPQLQTWAISATIGNIEQAARHALGTAGEPQLIGGAPARSTEIRSILP
DTIDGFPWAGHLGLRMYEELVARLNPGISTLLFTNTRNQSERWHQCLRFACPEMEKGLAL
HHSAIDRSEREAIEASVKAGSIRWVVCTSSLDLGVDFQPVEQVVQIGSPKNLARLLQRAG
RSAHLPGGTSQVLFMPTNALELLELSAVRRGLVEGLVEQRKPPKAPLDVLLQHLTGLACG
PGFNPEHTLQTVRSCAAYADLSQDDWDWCMLFLEQGGECLGAYPRYRKLEWEETSQRYRV
REKAIARLHRLNVGTITAAPAITVRFVRGAVLGHVEETFISQLKPKDVFFFSGRQLEFVR
LRDMTAYVKVSTKKTRTVPAWAGGQMALSDLLTHHLRLEVDRASRGDLDNAELQALKPLF
DRQQDISVLPTVGQLLIETCRTREGTHLFAYPFEGRFVHEGIGFLWASRLTRLERGTITV
SVNDYGFELLAPKSYPMAELLEDHIDLLLDRQQLERDLKNALNLSELQRRRFRAIAQIAG
LMNRGFPRSSKSTGQLQISASLLFDVFSRHEPNNRLLLQAQQEVLDDQLEISRLEAALKR
AASQEWLHVETPRPSPLAFPLLVERLNNRMSNESVLERVQRMKDEAIRKEG
NT seq 2496 nt   +upstreamnt  +downstreamnt
atggcagcttcaaaagcgaaggcgaaggcaaaggccaaaccaacaaccaacgaccctcgc
ttgaacccgattcatgcctggttcgcgcagagaaactggacaccgctgccgtttcagcag
gagacatggaacgcctatctagcggggcggaatgggttaatccaagtgcccacgggatcg
ggcaaaaccttcgccgctgttatgggaccgatggcgcggatgttggcggaggagcagccg
ttgaaaggaatacgtctcgtctacatcacgcccttgcgggccctcagccgcgacttgtcg
ctggcgatccgcgagccgatcgaggcgatggggtggccgattcgggtgggcatccgcaat
ggcgacagcagcagcagcgaacgcactaaacagctcaaggcgccgccacagattctggtg
acaactccggagtccctcgccctgctgcttagcaacgccaaggccgaagagctgtttggc
caactcgagacggtgatcctcgatgaatggcacgagttgatgggcagcaaacggggcagc
cagaccgagctgtgcctgagctggttgcggcagctgcgtccccagctccagacctgggcc
atcagtgccaccatcggcaacatcgagcaggcggcgcgccatgccctggggacggcaggc
gaaccgcagctgatcgggggtgcgccagcccgcagcacggagattcggagcatccttcca
gacacgatcgatggcttcccctgggctggacacctcggtttgcgtatgtacgaggagctg
gtggcccgcctcaatcccggcatcagcaccttgctgttcaccaacacccgcaatcagtca
gagcgttggcaccagtgtctgcgcttcgcatgcccggaaatggagaagggattggccctg
caccacagcgcgattgatcgcagtgagcgggaagcgatcgaagcctccgtgaaagccggc
agcattcgttgggtggtctgcacaagctctctggatctcggggtggacttccagcccgtg
gaacaggtagtgcagatcgggagccccaagaatctggctcggctgcttcagcgggcaggg
cggtcagcgcacttgcccggcggaacatcccaagtactgttcatgcccaccaatgccctt
gaactgcttgaactcagtgccgtgcggcgggggctggtggagggtctggtggaacaacgc
aagccgccgaaagcccctcttgatgtgctgctgcagcacctcacagggttggcctgcggc
cctggcttcaatcccgagcacacgttgcagaccgtgcggagctgtgccgcctacgccgat
ctgagtcaggacgactgggactggtgcatgctgtttctcgagcagggcggagagtgcctg
ggggcctatccccgttaccgcaagctcgagtgggaggagacaagccagcgctaccgggtt
cgagaaaaggccatcgcccggctgcaccgtctcaacgttggaacgatcacagccgcacca
gcgatcaccgtgcggtttgtccgtggtgccgttctcggccatgtggaggagaccttcatc
agccagctcaaaccgaaggatgtgttcttcttctccggccgccagctggaattcgtgcgg
ctgcgggacatgaccgcttacgtgaaagtgagcaccaagaagacgcgcacggtgcctgcc
tgggcagggggacagatggccctctccgatctgctgacccatcacctgcgtctcgaggtg
gaccgtgccagccggggtgatctcgacaacgctgaactgcaggctctgaaacccctgttt
gatcgacaacaggacatctcagtgctgccgacggttggtcagctgttgattgagacctgt
cgcacccgcgaaggcacgcacctgtttgcctacccctttgaaggacggttcgtacatgag
ggcatcggcttcctctgggcgtcgcgactcacccgtctggagcgaggcacgatcacggtg
tcggtgaacgactatggctttgagctgttggcaccaaagagctaccccatggcggagctg
ctggaggaccacatcgatctgctgctcgatcggcaacaactggagcgggatctgaagaac
gcactgaatctttccgagctgcaacggcgacgcttccgcgctatcgcccagatcgctggt
ctgatgaaccgcggcttccctagatcgagcaaaagcaccggccaacttcagatcagtgcc
tcgctgctgttcgatgtgttcagccgccatgaaccgaacaatcgcttgctgctgcaggcc
caacaggaagtgctcgatgaccagttggagatctcacgcctggaggctgccttgaaacgt
gctgcaagccaggaatggctgcacgttgaaacccctcgccccagcccgctggcctttccg
ctgctggtggaacggctcaacaacaggatgagcaatgaatccgttttggagcgggttcag
cggatgaaggacgaggccatccgcaaagagggttga

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