Synechococcus sp. CC9605: Syncc9605_1650
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Entry
Syncc9605_1650 CDS
T00292
Name
(GenBank) probable exodeoxyribonuclease V, alpha subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
syd
Synechococcus sp. CC9605
Pathway
syd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Syncc9605_1650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syd03400
]
Syncc9605_1650
Enzymes [BR:
syd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Syncc9605_1650
DNA repair and recombination proteins [BR:
syd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Syncc9605_1650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
UvrD-helicase
nSTAND3
PhoH
UvrD_C
SLFN-g3_helicase
PIF1
SH3_13
AAA_16
AAA
Helicase_RecD
AAA_28
ATPase
DUF815
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ABB35399
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All DBs
Position
complement(1517849..1519429)
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AA seq
526 aa
AA seq
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MTELLPPGTSTWPASFTAGLHVALRRRIPPQVDGPPLEELSRDLVTALEQGELTVALTPE
RLAVAQASGWLEGDASPLLLQADRLGWRRWLQAMEQVVTELVERAHAPVPKPVKAVDPEL
SDRLNAEQCAAVRALDQASVVLLSGGPGTGKTSTVVEILARAEARHPGLRIGLAAPTGKA
ARRLGDAVLAQRAPLPCSTLHRWLEAGSRGFGRHRQRPLELDLLVIDEMSMLDLALTQVL
LEALPSGCRLLLVGDPAQLPPVGSGAVWHRLQQPDVRSRFGEGAVHLERTYRNRGALAQV
AHQLRQGDLAAFAADLAALPAQANLQVHPSPLRRFPALVRQRWLERLQLLQARTVDLNRC
SEKELMAESRPLFALLEQDLLLCPRRRGPWSLDDVHRTLLGANAAGKVERWPIGLPVICG
SNQPELGLANGDLGVVIGAGSERRLLFQVVDPDGQLQVRRLHPARLRRLEPAVALTIHRA
QGSEADRVIVLWPDPLEDGPAADHQRRLLYTAITRARASLDLVTLI
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagttgctgcccccgggaaccagcacgtggcccgccagcttcacggctggcctc
catgtcgctctgcggcgtcggatcccgccccaagtggatggcccccctttagaggagctc
agtcgcgacctggtgacggccttggagcagggggagttgacggtggcgctgacgccggaa
cggctggccgttgcccaagccagtggctggcttgagggggatgcctcccccctgctgctt
caggctgatcggttgggctggcgccgctggttgcaggccatggagcaggtggtgaccgag
ctggtggagcgggcccacgctccggttcccaagcccgtcaaggctgtcgatcccgagctg
tcggatcgtctcaacgctgaacagtgcgctgccgtgcgcgccttggatcaggcctcggtt
gtgctgctcagcggtggtccgggtacgggcaaaaccagcacggtggtggagattctggcc
cgggcggaagcccgccatcccggcctgcgcattggtttggcggcccccaccggcaaggcg
gcccggcgcctgggggatgcggtgctggcgcaacgggctccgttgccttgcagcaccctc
caccgctggttggaggccggcagccgtggctttggcaggcaccgccagcgtcccttggag
ctggatctgctggtgatcgatgagatgtcgatgctggatctggccttgacccaggtcctg
ctcgaggcgttgcccagcggttgccggctgctgttggtgggggatccagcccaactgccg
ccggtggggagtggagcggtctggcaccggcttcagcagccggacgttcgcagtcgcttc
ggtgaaggggcggtgcacctcgagcgcacttatcgcaaccgcggtgccctggcccaggtg
gcgcaccagctgcgccagggggatctggccgcgttcgctgcggatttggctgcgttgcct
gcgcaggccaatctgcaggtgcatcccagccccctgcgtcgttttccagccttggtgcgc
cagcgctggcttgagcgcctccagctgctgcaggcgcggacggttgatctcaaccgctgc
agcgaaaaggagctgatggcggagtcccggcccttgtttgcgctgctcgagcaggatctg
ttgctctgtccacgccgccgggggccgtggagtcttgatgatgtgcaccgcacgctgctg
ggggccaatgccgccggcaaggttgagcgttggccgatcggcttgccggtgatctgcggc
agcaatcaaccggaactcggtttggccaatggcgatctcggggttgtgatcggggcaggc
tctgaacgacgcctgttgttccaggtggtggatccggatggccagctgcaggtgcgccgt
ttgcatccagctcgtttgcggcgtctggagccggcggtggcgctcaccatccatcgggct
cagggcagtgaggcggatcgggtgatcgtgctctggcccgatcccctcgaggatggcccg
gctgctgaccatcaacgccgtttgctttacacagcgatcactcgagcccgtgccagcctt
gatctggtgacgctgatctga
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