Synechococcus sp. CC9605: Syncc9605_1651
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Entry
Syncc9605_1651 CDS
T00292
Name
(GenBank) probable exodeoxyribonuclease V, beta subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
syd
Synechococcus sp. CC9605
Pathway
syd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Syncc9605_1651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syd03400
]
Syncc9605_1651
Enzymes [BR:
syd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Syncc9605_1651
DNA repair and recombination proteins [BR:
syd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Syncc9605_1651
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ABB35400
LinkDB
All DBs
Position
complement(1519426..1523106)
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AA seq
1226 aa
AA seq
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MEVNTGFEAGVEQTPSMAQRFDANTYPLDPGIRLLEASAGTGKTFALAHLCLRLITEADH
PLEALLVVTFTDAAAEELRSRIGQRLQQALQGLEQLDQGMKAYAPDPVLADWLAGSEPGD
ARQRWIRHLLVALEQLDRADITTIHGFCRRSLRRLALSNAAAMEPQLDTDATALQAEVVQ
DLWQQELLSLPPDQFKALRQRGLSPQTLRRGLAQLDGEQQPRFRGADGAIDLDQPLAPQL
EHWLAQLWHDFVPLWQRDHADLDAGFRQAAEQWKAQGCGATSPYSAKPKTDRCAQINQWL
DGQTAVPSLLEIAAREKPLKEYFHPGSWCKVARKCGESDPSLVMPALQAAVAALWDAPIE
RTWQYLLERCLQELDRRRRRRGVITFGGLLAAMDPGDGAVAWLAPLQQRYRAVMVDEFQD
TDPVQWRLLQRAFGAGERHLLLMVGDPKQAIYRFRGGDLATYMAARDQVERIDHLLDNFR
TTAPLMEGLNRLMAPGLPRSELLVPAVQPRSSATPPQDAPALQLLLLSTEAPSSRSALEA
DLPRRLAAMVLQQLQQRDDLTPADLCVLVSRHQQAEDLRRALGACGLPTRLVTQGDVLDS
EAALLLQWFLDALVEPGDDARLRLLACSGLMNIAPDALEPGRLDQLAVQLRGWAELMPRL
GLLGALADLLSGEQMAGLSERGRMLGDLQQAARLVQEAMHRQGLDVATAADWLRRERLHP
SQPVPEARQPHSDQADSAIAVVTVHRSKGLEYPVVICPYLWQSPPAVSGPLWRDPRSGEC
LARVDVHWGEGWQAAQQAQQDAAAEAERLAYVAVTRAQTQLILIWARANGQEDSPLPAWL
FGAEAAGDAIDSLTDERLRQALAERQVPISIDGLVESLPSGKRWRPPLQAEPLALGSIPK
RIDRSWGRASYSAWIASSDDVQLHEQGRDRDPGAEESTSESTLELMAARAEQAWSKTGPL
AAFPRGAGAGDCLHRILEQFPFSAAEATEPRQRHELIVAELRLAGLDPDLQNDVLTGLEQ
VLQTPLGGPLGALSLDRLGPHQRLPELSFDLPVQHVRTADLVAAFGCDAEARFGRSYSPA
LASLSINSRGFLTGSIDLVFQDPQHQRWWVLDWKSNWIGERRTSAEPGLCGPHHYSQAAM
EEQMLHHHYPLQAHLYLVALHRHLRWRLPDYNPQQHLGGYVYCFLRGMPGAVRASPEHAV
GPGRIVEPVPLNRIAALDRALGEVPA
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atggaagttaacactggttttgaggccggagttgagcagactccatccatggcccagcgc
ttcgatgccaacacataccccctcgaccctgggattcgcctgctggaggccagcgctggc
accggaaaaacctttgccctggcgcatctctgcttgcggctgatcacggaggccgaccac
cctctcgaggcgttgttggtggtgaccttcaccgatgcagcggccgaagagctgcgctcc
cgcatcggccagcggctgcagcaggcgttgcagggcctcgagcagcttgaccaggggatg
aaggcttatgctccagaccccgtcctggcggattggctggcgggttccgagccaggggat
gcgcgtcagcgctggattcggcacctgctggtggccttggagcagttggaccgggccgac
atcaccaccatccatggtttttgtcgccgcagcctgcgccgcctggccctcagcaacgct
gcagcgatggagccccagctggacaccgacgccaccgcgctccaagccgaggttgtgcag
gacctctggcaacaggagctgctcagcctgccgccggatcagttcaaggcgttgcgtcaa
cgcggcctctcgccccagaccctgcgcagggggttggcgcaactcgatggcgaacagcag
ccgcggttcaggggcgctgatggggcgatcgatctggaccagcccctcgctcctcagctg
gagcactggctggcgcagctctggcacgacttcgtgccgctctggcagcgggaccatgcc
gacctggatgccgggttccgtcaggcggccgagcagtggaaagctcagggctgtggagcc
accagcccttattccgccaagcccaagaccgatcgctgcgcccagatcaaccagtggctg
gatgggcagaccgcagtgccatcgctgctggagattgccgcccgtgagaagccgctgaag
gagtacttccaccccggcagttggtgcaaggtcgcgcgcaagtgcggtgagtccgacccc
agcctggtgatgccggctctgcaggccgccgttgcggcgctctgggatgcaccgattgag
cgcacctggcagtacctccttgaacggtgcttgcaggagctggaccgccgccgtcgccgc
cgtggggtgatcaccttcggtggcttgttggccgccatggatcccggcgatggcgctgtt
gcctggcttgcaccgctgcaacagcgttaccgggctgtgatggtggatgagtttcaggac
accgaccccgtgcagtggcgcctgttacagcgcgcctttggtgctggtgaacgccacctg
ctgctgatggtcggggatcccaagcaggcgatctaccgcttccgtggtggtgatctggcg
acctacatggcagcgcgggatcaggtggaacggatcgatcacctgctcgacaacttccgc
acaacggcaccgctgatggaggggttgaaccgcttgatggctccgggtctcccccgatct
gaactgctggtgcccgcggtgcagccccgcagctccgccaccccaccgcaggatgccccg
gcgttgcaactgctgctgctctccacggaggcgccctccagccgcagtgctctggaagca
gatctgccccgacggctcgccgcgatggtgctgcagcaactgcagcaacgggacgacctc
accccagcggatctctgtgtgctggtgagtcgccatcaacaggcggaagacctgcgccgc
gccctgggggcctgcgggcttcccacccgcctggtgacccagggggatgtgctcgacagt
gaagccgcattgctgttgcagtggttcctcgatgccctggtggaaccgggcgatgacgct
cgcctgcgcctgctggcctgctcgggactgatgaacatcgcgcccgatgctctggagccg
gggcggttggatcagctggctgtgcagctgcgtggttgggctgagctgatgccgcggctg
ggcctgctcggggctctggccgatctgctcagcggtgaacagatggcggggctgtcggaa
cggggccggatgctgggggatctgcagcaggcggcgcggctggtgcaggaggcgatgcac
cgccaggggcttgatgtggccaccgcggcggattggttgcggcgggagcgtttgcacccc
agccagccggtgccggaggcccgtcagccccacagcgatcaggccgacagtgccatcgcc
gtggtcactgtccaccgcagcaaggggctggaatatccggtggtgatctgcccctacctc
tggcagtcgcccccagccgtgtccggtccgctctggcgtgatccccgctccggggagtgc
ctggcgcgggtggatgttcattggggggagggctggcaggccgcgcaacaggcgcagcag
gacgctgcggcggaggccgagcggctggcctatgtcgcggtcacccgagcccaaacccag
ttgatcctgatctgggccagggccaacggccaggaggattccccattgcccgcctggttg
ttcggagctgaagccgctggggatgcgatcgacagcctcaccgatgagcggctgcgtcaa
gccctggcggagcgacaggttccgatcagcatcgatggcctggtcgaaagcctgcccagt
ggcaagcgttggcggcctccgctgcaggccgagcccttggcccttggttccatccccaag
cggatcgaccggagttggggcagggccagttactcggcctggattgcctcatccgacgac
gttcagctgcatgaacagggtcgcgatcgcgatccaggcgctgaggaatcgacgtcggaa
tcgacgttggaactgatggcggcgagggcagaacaggcatggtctaagacggggccgctg
gcggcctttccgcgcggggccggggccggggactgtctgcaccggatcctcgaacagttc
cccttttctgcggcggaggccacggagccccgccaacggcacgagctgatcgtcgccgag
ttgcgcctggccgggcttgatcccgatctgcaaaacgatgtgttgacagggttagagcag
gtgttgcagacgcccctcgggggaccgctgggggcgttgtcgctggatcggctggggccg
caccagcgcctgcctgaactcagttttgatctgccggtgcagcacgtgcgcacggccgat
ctggtggccgccttcggctgtgatgccgaggcccgttttggccgctcttacagcccggcg
ctggcgtcgctctcgatcaacagccgcgggtttctcaccggttccatcgatctggtgttc
caggacccccagcaccaacgctggtgggttctcgactggaagagtaattggatcggtgaa
cggcgcaccagtgctgagccgggactgtgtggaccgcatcactactcccaggcggcgatg
gaggagcagatgctgcaccaccactaccccctgcaggcccacctctacctggtggccctg
caccgccatctgcgttggcggctgccggattacaacccgcagcagcatctggggggctat
gtctactgcttcctgcgggggatgcccggagctgtgagagcctctccggagcatgctgtt
ggaccggggcgcatcgttgaacccgtgccgctcaatcgcatcgcagccctggatcgagct
ctgggggaggtgccggcgtga
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