KEGG   Synechococcus sp. CC9605: Syncc9605_1651
Entry
Syncc9605_1651    CDS       T00292                                 
Name
(GenBank) probable exodeoxyribonuclease V, beta subunit RecB
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
syd  Synechococcus sp. CC9605
Pathway
syd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:syd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Syncc9605_1651
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:syd03400]
    Syncc9605_1651
Enzymes [BR:syd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Syncc9605_1651
DNA repair and recombination proteins [BR:syd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Syncc9605_1651
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 AAA_11 AAA_25
Other DBs
NCBI-ProteinID: ABB35400
LinkDB
Position
complement(1519426..1523106)
AA seq 1226 aa
MEVNTGFEAGVEQTPSMAQRFDANTYPLDPGIRLLEASAGTGKTFALAHLCLRLITEADH
PLEALLVVTFTDAAAEELRSRIGQRLQQALQGLEQLDQGMKAYAPDPVLADWLAGSEPGD
ARQRWIRHLLVALEQLDRADITTIHGFCRRSLRRLALSNAAAMEPQLDTDATALQAEVVQ
DLWQQELLSLPPDQFKALRQRGLSPQTLRRGLAQLDGEQQPRFRGADGAIDLDQPLAPQL
EHWLAQLWHDFVPLWQRDHADLDAGFRQAAEQWKAQGCGATSPYSAKPKTDRCAQINQWL
DGQTAVPSLLEIAAREKPLKEYFHPGSWCKVARKCGESDPSLVMPALQAAVAALWDAPIE
RTWQYLLERCLQELDRRRRRRGVITFGGLLAAMDPGDGAVAWLAPLQQRYRAVMVDEFQD
TDPVQWRLLQRAFGAGERHLLLMVGDPKQAIYRFRGGDLATYMAARDQVERIDHLLDNFR
TTAPLMEGLNRLMAPGLPRSELLVPAVQPRSSATPPQDAPALQLLLLSTEAPSSRSALEA
DLPRRLAAMVLQQLQQRDDLTPADLCVLVSRHQQAEDLRRALGACGLPTRLVTQGDVLDS
EAALLLQWFLDALVEPGDDARLRLLACSGLMNIAPDALEPGRLDQLAVQLRGWAELMPRL
GLLGALADLLSGEQMAGLSERGRMLGDLQQAARLVQEAMHRQGLDVATAADWLRRERLHP
SQPVPEARQPHSDQADSAIAVVTVHRSKGLEYPVVICPYLWQSPPAVSGPLWRDPRSGEC
LARVDVHWGEGWQAAQQAQQDAAAEAERLAYVAVTRAQTQLILIWARANGQEDSPLPAWL
FGAEAAGDAIDSLTDERLRQALAERQVPISIDGLVESLPSGKRWRPPLQAEPLALGSIPK
RIDRSWGRASYSAWIASSDDVQLHEQGRDRDPGAEESTSESTLELMAARAEQAWSKTGPL
AAFPRGAGAGDCLHRILEQFPFSAAEATEPRQRHELIVAELRLAGLDPDLQNDVLTGLEQ
VLQTPLGGPLGALSLDRLGPHQRLPELSFDLPVQHVRTADLVAAFGCDAEARFGRSYSPA
LASLSINSRGFLTGSIDLVFQDPQHQRWWVLDWKSNWIGERRTSAEPGLCGPHHYSQAAM
EEQMLHHHYPLQAHLYLVALHRHLRWRLPDYNPQQHLGGYVYCFLRGMPGAVRASPEHAV
GPGRIVEPVPLNRIAALDRALGEVPA
NT seq 3681 nt   +upstreamnt  +downstreamnt
atggaagttaacactggttttgaggccggagttgagcagactccatccatggcccagcgc
ttcgatgccaacacataccccctcgaccctgggattcgcctgctggaggccagcgctggc
accggaaaaacctttgccctggcgcatctctgcttgcggctgatcacggaggccgaccac
cctctcgaggcgttgttggtggtgaccttcaccgatgcagcggccgaagagctgcgctcc
cgcatcggccagcggctgcagcaggcgttgcagggcctcgagcagcttgaccaggggatg
aaggcttatgctccagaccccgtcctggcggattggctggcgggttccgagccaggggat
gcgcgtcagcgctggattcggcacctgctggtggccttggagcagttggaccgggccgac
atcaccaccatccatggtttttgtcgccgcagcctgcgccgcctggccctcagcaacgct
gcagcgatggagccccagctggacaccgacgccaccgcgctccaagccgaggttgtgcag
gacctctggcaacaggagctgctcagcctgccgccggatcagttcaaggcgttgcgtcaa
cgcggcctctcgccccagaccctgcgcagggggttggcgcaactcgatggcgaacagcag
ccgcggttcaggggcgctgatggggcgatcgatctggaccagcccctcgctcctcagctg
gagcactggctggcgcagctctggcacgacttcgtgccgctctggcagcgggaccatgcc
gacctggatgccgggttccgtcaggcggccgagcagtggaaagctcagggctgtggagcc
accagcccttattccgccaagcccaagaccgatcgctgcgcccagatcaaccagtggctg
gatgggcagaccgcagtgccatcgctgctggagattgccgcccgtgagaagccgctgaag
gagtacttccaccccggcagttggtgcaaggtcgcgcgcaagtgcggtgagtccgacccc
agcctggtgatgccggctctgcaggccgccgttgcggcgctctgggatgcaccgattgag
cgcacctggcagtacctccttgaacggtgcttgcaggagctggaccgccgccgtcgccgc
cgtggggtgatcaccttcggtggcttgttggccgccatggatcccggcgatggcgctgtt
gcctggcttgcaccgctgcaacagcgttaccgggctgtgatggtggatgagtttcaggac
accgaccccgtgcagtggcgcctgttacagcgcgcctttggtgctggtgaacgccacctg
ctgctgatggtcggggatcccaagcaggcgatctaccgcttccgtggtggtgatctggcg
acctacatggcagcgcgggatcaggtggaacggatcgatcacctgctcgacaacttccgc
acaacggcaccgctgatggaggggttgaaccgcttgatggctccgggtctcccccgatct
gaactgctggtgcccgcggtgcagccccgcagctccgccaccccaccgcaggatgccccg
gcgttgcaactgctgctgctctccacggaggcgccctccagccgcagtgctctggaagca
gatctgccccgacggctcgccgcgatggtgctgcagcaactgcagcaacgggacgacctc
accccagcggatctctgtgtgctggtgagtcgccatcaacaggcggaagacctgcgccgc
gccctgggggcctgcgggcttcccacccgcctggtgacccagggggatgtgctcgacagt
gaagccgcattgctgttgcagtggttcctcgatgccctggtggaaccgggcgatgacgct
cgcctgcgcctgctggcctgctcgggactgatgaacatcgcgcccgatgctctggagccg
gggcggttggatcagctggctgtgcagctgcgtggttgggctgagctgatgccgcggctg
ggcctgctcggggctctggccgatctgctcagcggtgaacagatggcggggctgtcggaa
cggggccggatgctgggggatctgcagcaggcggcgcggctggtgcaggaggcgatgcac
cgccaggggcttgatgtggccaccgcggcggattggttgcggcgggagcgtttgcacccc
agccagccggtgccggaggcccgtcagccccacagcgatcaggccgacagtgccatcgcc
gtggtcactgtccaccgcagcaaggggctggaatatccggtggtgatctgcccctacctc
tggcagtcgcccccagccgtgtccggtccgctctggcgtgatccccgctccggggagtgc
ctggcgcgggtggatgttcattggggggagggctggcaggccgcgcaacaggcgcagcag
gacgctgcggcggaggccgagcggctggcctatgtcgcggtcacccgagcccaaacccag
ttgatcctgatctgggccagggccaacggccaggaggattccccattgcccgcctggttg
ttcggagctgaagccgctggggatgcgatcgacagcctcaccgatgagcggctgcgtcaa
gccctggcggagcgacaggttccgatcagcatcgatggcctggtcgaaagcctgcccagt
ggcaagcgttggcggcctccgctgcaggccgagcccttggcccttggttccatccccaag
cggatcgaccggagttggggcagggccagttactcggcctggattgcctcatccgacgac
gttcagctgcatgaacagggtcgcgatcgcgatccaggcgctgaggaatcgacgtcggaa
tcgacgttggaactgatggcggcgagggcagaacaggcatggtctaagacggggccgctg
gcggcctttccgcgcggggccggggccggggactgtctgcaccggatcctcgaacagttc
cccttttctgcggcggaggccacggagccccgccaacggcacgagctgatcgtcgccgag
ttgcgcctggccgggcttgatcccgatctgcaaaacgatgtgttgacagggttagagcag
gtgttgcagacgcccctcgggggaccgctgggggcgttgtcgctggatcggctggggccg
caccagcgcctgcctgaactcagttttgatctgccggtgcagcacgtgcgcacggccgat
ctggtggccgccttcggctgtgatgccgaggcccgttttggccgctcttacagcccggcg
ctggcgtcgctctcgatcaacagccgcgggtttctcaccggttccatcgatctggtgttc
caggacccccagcaccaacgctggtgggttctcgactggaagagtaattggatcggtgaa
cggcgcaccagtgctgagccgggactgtgtggaccgcatcactactcccaggcggcgatg
gaggagcagatgctgcaccaccactaccccctgcaggcccacctctacctggtggccctg
caccgccatctgcgttggcggctgccggattacaacccgcagcagcatctggggggctat
gtctactgcttcctgcgggggatgcccggagctgtgagagcctctccggagcatgctgtt
ggaccggggcgcatcgttgaacccgtgccgctcaatcgcatcgcagccctggatcgagct
ctgggggaggtgccggcgtga

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