Synechococcus sp. CC9605: Syncc9605_1653
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Entry
Syncc9605_1653 CDS
T00292
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
syd
Synechococcus sp. CC9605
Pathway
syd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Syncc9605_1653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syd03400
]
Syncc9605_1653
Enzymes [BR:
syd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Syncc9605_1653
DNA repair and recombination proteins [BR:
syd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Syncc9605_1653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ABB35402
LinkDB
All DBs
Position
complement(1523471..1526716)
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AA seq
1081 aa
AA seq
DB search
MLTVYRSNRAEFLARLLSRQLIEQQPGPLETVEVMVNTWPTSRWLGEQLATANGISSLVR
FPFPGSRLRQLVRQVLHLPAQEDDPWRAGQLVWAVLELLPELLEQPVAQPLRVWLAQREG
TASGLTRDRWQLARSIADAMDDYALYRPDQLEQWKQPRPDDDWQPVLWRLLAQRLPRAPF
GLQVREAVECLRRGDVDPALLPERLRLFGISALAPVQVDLIQALSGLLAVEIYLLTPCPD
LWQRCGSRRASLGDEWLIPPDGGWLAEAPRLEAVLGRMGAEFQQLLEGSGEAQLGERREG
DLFAGSLQIAAAEERQPTLLDQLQQQLVDAESIAELNRSSDDQSLLFQAAPGPWREVQLV
RDRILQWLAADPDLEPRDVLVMTPQIERYAPLLSSVFNDTAAFGVDLPWRLTDRSQQSSP
GLSMAMFTLLELAATRLTATGLERLLANPALQGQQGLTPEEAVLITQTLQRSGFRWGLDA
RERGGDEVHSLRWCLDRWLLGLVLPVEPGLAPAGAAPFQQELDPDRLVRWWTLLDRVARM
LDRLREPRPCHGWVELLQSLLQELFAEGGAWTDEAQSWAAALEEWRLRAHDCPLDLDAAV
ALEVLQEALSVDSGRFGHRSGALTISALEPMRAIPHKVVILMGLDSADFPRPSRRPGFHL
LEQQRRLGDPRSSDQDRYVLLEALMSARRHLLISWCGRLERTGEPQPPAAPVEQWLSVLQ
EQLQRAGASTEGLLVTPAANPLSRENFRPEAPLSCDRRQLEARRCLDAAPASVPNPQGLA
WASLWQPEINDDEAEGRDGDDLALDPEALLAWLQQPQKAWLQARGLRPGEGIEAVEDLEA
LELEGLQRYLLLNHELEEQFILGSAPDWTASLAGQGVLPAGAGAALEQEELQQRWQALQR
QLASLGPCRREVPVLAGLPMPLLYAGDTQVVVQPGMLTAAAVMRGWLQHLLLCAEGSAPA
AGSAVVARSTRVAGAEVHVRWSVLPTVEAEDQLQQLARLARQGLERCWPVPPKSGWQMVA
KERRKPGEGQQDFRKTWQDEGATPLMQLCFGSDVAAEQLMDQAGFQQACQLLYGPLMANL
R
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
ttgctgacggtttaccgaagcaacagggctgaatttctggctcgcttgctctcccgtcag
ttgatcgagcagcagccgggcccccttgagacggtggaggtgatggtcaacacttggccc
accagccgatggttgggggaacagctggccacggccaatggcatcagttccctggtgcgg
ttccccttcccgggcagtcgcctgcggcagctggtgcgccaggtgctgcatcttcctgct
caggaggacgatccctggcgggcgggccagctggtgtgggcggtgctcgagttgctgccg
gagctgctggagcagcccgtcgcccagccgttgcgggtttggctcgcccagcgtgaagga
accgcctcggggttgacgcgggatcggtggcagttggcccgttccatcgccgatgccatg
gacgattacgccctttaccgccccgatcaactcgagcagtggaaacaaccgcggcctgat
gacgactggcagcctgtgctctggcgactgctggcccaacggctgccccgggctcccttt
ggcctgcaggtgcgtgaggccgtcgagtgtctccggcgaggagatgttgatccggccctg
ctgccggagcggctgcggctcttcggcatcagtgctctggcgccggtgcaggtggatctg
attcaggccttgtccggtctgctggcggtggagatctacctgctcaccccgtgtccggat
ctatggcagcgctgcggcagtcggcgcgcctcgctcggggatgaatggctgatccctccg
gatgggggatggttggcggaggcgccgcgtttggaggccgttctcgggcggatgggcgcc
gaatttcaacagttgctggagggctccggtgaagcgcagctgggggagcgccgcgaggga
gatctgtttgcaggttctctgcagatcgccgcggcggaagagcgtcagcccaccttgctc
gatcagcttcagcagcagctggtggatgccgagagcatcgctgagctgaatcgttcctca
gacgatcaatctctgttgtttcaggcggcaccggggccttggcgggaggtgcaactggtg
cgggatcgcatcctgcagtggctggcggccgatcccgatctcgagccccgcgacgtgctg
gtgatgacgccgcagatcgagcgctatgcgccgctgctcagctccgtgttcaacgacacg
gcggctttcggtgtcgatttgccctggcgcctcaccgaccgcagtcagcagagcagtccg
gggttgtcgatggcgatgttcacgctgctggagctggctgcgacacgcctcaccgccacg
gggctggaacgtctgctggccaacccggccttgcagggccagcagggactcacgccggaa
gaggcggtgttgatcacgcaaacactgcaacgcagcggttttcgctggggcttggacgcc
cgtgagcggggcggtgacgaggtgcacagcctgcgttggtgtctcgaccgttggctgctg
ggtctggtgctgccggtggagccgggtctggctccggcaggggcggcacccttccagcag
gagctggaccccgatcgcctggtgcgttggtggacgctgctggatcgtgtggcgcggatg
cttgatcgccttagggagccccggccgtgccatggctgggtggagctgctccaatccctg
ttgcaggagctgttcgctgagggcggggcctggactgatgaggcgcagagctgggcggcg
gcgctggaggagtggcggctgcgggcccatgactgccctctggacctcgacgctgccgtg
gccttggaggtgctgcaggaggccttgtcggtggacagcggccgcttcggtcaccgcagt
ggtgccctcaccatcagtgccctggagccaatgcgggcgattccgcacaaggtggtgatc
ttgatgggcctcgacagcgccgactttccgcgcccaagccgccgtccgggctttcatctc
ctcgagcagcaacggcgcctgggggatccccgcagcagcgaccaggaccgctacgtgctg
ctggaggctttgatgtcggcacgccgtcatctgctgatcagctggtgcgggcggctggag
cgcaccggtgagcctcagccgcctgctgcgccggtggaacagtggctgtcagtgctgcag
gagcagttgcaacgggccggtgcctccacggaagggttgttggtcacgccggcggccaat
cccctctcccgtgagaacttccggcccgaggcaccgctcagctgtgatcggcgtcagctg
gaggcccggcgctgcctggatgctgctccggcttcagtcccgaatccccaggggctggcc
tgggcatcgctctggcagccggagatcaacgatgacgaggccgagggacgggatggagac
gatctagccctggaccctgaagctttgctggcctggttgcagcagccccagaaggcctgg
ttgcaggcccgggggttgcggcctggggaaggcattgaggcggtggaggatctcgaggcg
ctcgagttggagggcctgcagcgctatctgctgctcaaccacgagcttgaggagcagttc
attcttggatcggctccggattggacggcgtcgctggcggggcagggtgtgctgccggcg
ggggctggggcggcccttgagcaggaggaactgcagcagcgttggcaggccctgcaacgg
cagctggcatcactcggcccctgccgcagggaggtgccggtgctcgccggcctgccgatg
cccctgctctacgccggtgacacccaggtggtggtccagcccgggatgctcacggccgcg
gcggtgatgcgcggctggttgcagcacctgttgctttgcgctgagggatcggctcctgca
gccggttcagcggtggtggcgcgcagcacccgggttgccggcgccgaggtgcacgtgcgc
tggtcggttttgccgacggttgaggccgaagaccagctgcagcagctggcgcggctggcg
cgacaggggctggagcggtgctggccggtccctcccaagagcggctggcagatggtggcc
aaagagcggcgcaaaccgggggaggggcagcaggacttccgcaagacctggcaggacgaa
ggggccaccccattgatgcagctctgcttcggctcggacgtcgctgcggagcaattgatg
gatcaggccggattccagcaggcgtgtcagctgttgtacggcccccttatggcgaacctg
cgttag
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