Synechococcus sp. CC9605: Syncc9605_2011
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Entry
Syncc9605_2011 CDS
T00292
Name
(GenBank) putative long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
syd
Synechococcus sp. CC9605
Pathway
syd00061
Fatty acid biosynthesis
syd00071
Fatty acid degradation
syd01100
Metabolic pathways
syd01212
Fatty acid metabolism
syd02024
Quorum sensing
syd04146
Peroxisome
Module
syd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
syd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Syncc9605_2011
00071 Fatty acid degradation
Syncc9605_2011
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Syncc9605_2011
09145 Cellular community - prokaryotes
02024 Quorum sensing
Syncc9605_2011
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
syd01004
]
Syncc9605_2011
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
syd04147
]
Syncc9605_2011
Enzymes [BR:
syd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Syncc9605_2011
Lipid biosynthesis proteins [BR:
syd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Syncc9605_2011
Exosome [BR:
syd04147
]
Exosomal proteins
Exosomal proteins of breast milk
Syncc9605_2011
Exosomal proteins of breast cancer cells
Syncc9605_2011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
GH3
Motif
Other DBs
NCBI-ProteinID:
ABB35752
LinkDB
All DBs
Position
complement(1830764..1832677)
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AA seq
637 aa
AA seq
DB search
MTASWSPTTRETDALQRHAHVQRLPRVDAVWPWLADRHGLIAAVDAPHAANPERFNFGEL
AERIATAAAAFRRHGVKEGDVVALFAENSPRWLVADQGLMRAGAADAVRGASAPVEELCY
ILSDCQATALVVQNAEVWRRLALPPDQRAQLRFVLQLEGEPAEGAMGWEAFLASGAGLDP
VGPAGGRDAVATVLYTSGTTGQPKGVPLTHANLLHQMSSLACVAYPEPGAPVLSVLPIWH
AYERSASYFFLSCACTQTYTTIKQLKKDLPRVRPIAMATVPRLWEAVQAGFEDVLKTFPP
SRQRLLRAALANSAAQRKAVRTARNLLLEPVSASGRLRACGSAALRWPLHALASTLIWPK
LRRQLSGGQLAYPISGGGAIAPHIDAFFEAVGIELLVGYGLTETSPVVSCRRPWRNIRGS
SGLPMPQTEFRIVDPDNGQPLGFRQRGRVMVRGPQVMVGYLGKPEASAKVLDTAGWFDTG
DLGMLLPDGSVALTGRAKDTIVLSSGENIEPGPLEEALVASPLIEQVMLVGQDERQLGAL
IVPRAEAIVAWAAEACVNVAQDLGGQPGDPALLRLLMRECNRLLKQRWGSRGDERLAGVV
LVDPFSIENGLLTQTLKQRRDRITSRDQHLIDGLYGR
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgacggccagctggagcccgacaacccgtgaaacggacgctttgcagcgtcatgcccat
gttcagaggttgccgagggtcgatgcggtgtggccctggctcgccgaccgccatgggctg
attgccgccgtcgatgcgccccatgcggcgaatcccgaacgcttcaatttcggcgaactg
gcggagcgcatcgccaccgctgccgccgcctttcggcgccatggcgtgaaggaaggcgat
gtggtggctttgtttgctgagaacagcccccgctggctggtggcggatcagggcctgatg
cgtgccggtgccgctgatgccgtgcgcggagcctcggctccagtggaggagctgtgctac
atcctttcggattgccaggcaacggctctggtggtgcagaacgctgaggtgtggcgtcgt
ctggcccttcccccagaccagcgggctcagctgcgttttgtgcttcagctggaaggggag
cctgccgagggcgccatgggctgggaggcgtttctggcgtcaggggccggcctcgatccc
gttggcccggcgggggggcgagacgccgttgccactgttctgtacacctcgggcacgacc
ggccaacccaaaggggtcccgttgacccacgccaacctgctgcatcagatgagctcactg
gcctgtgtggcctatcccgagcccggtgctcctgtgctgagtgtgttgcccatctggcat
gcctacgagcgcagtgccagctacttcttcctctcctgtgcctgcacgcagacctacaca
accatcaagcaactgaagaaggatctgccgcgggtccggccgatcgcgatggccaccgtg
ccgcggctttgggaggcggttcaggctggatttgaggatgtgcttaaaaccttccccccc
tcccggcagcgcctgctgcgggcggcattggccaacagcgctgcccagcgcaaagccgtg
cgaacggcgcgcaacctcctgctggaaccggtgtcagcctccggccggctacgtgcctgc
ggctccgccgccctgcgctggcccctgcatgccctggcgtcgaccttgatctggccgaag
ctgcggcgccagctcagtggtggtcagctcgcctatccgatcagcggtggcggtgccatc
gcgccccacatcgatgccttttttgaagccgtggggattgagctgctggtgggctacggc
ctcaccgaaaccagccctgtggtgagttgccgcaggccctggcgcaacatccgcggcagt
tccgggctgccgatgccccagaccgaattccggatcgtcgatcccgacaacggccagccc
ctgggcttccggcaacgggggcgggtgatggtgcgtggcccccaggtgatggtgggctac
ctcggcaaacctgaggccagcgccaaggttctcgataccgcgggatggtttgacaccggc
gatctcggcatgctcctgccggatggttcggtggccctcaccggccgggccaaagacacg
attgtgttgagcagtggcgagaacatcgagcccggcccgctggaagaggccctggtggcc
agccccttgatcgagcaggtgatgctggtgggtcaggacgaacgccagctcggtgccctg
atcgttccccgtgctgaggcgatcgtggcctgggcggcagaagcctgcgtaaacgtggca
caggacctgggcggacaacccggtgatccggccctgcttcgcttgttgatgcgcgaatgc
aaccgcttgctcaagcagcggtggggctcccggggtgatgaacggctggcgggggtggtg
cttgtggatcccttcagcattgagaacggtctgttgacccagaccctgaagcagcgccgt
gatcgcatcaccagccgcgatcagcatttgatcgatggcctttacggacgttga
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