Synechococcus sp. CC9605: Syncc9605_2066
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Entry
Syncc9605_2066 CDS
T00292
Name
(GenBank) DNA-directed RNA polymerase
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
syd
Synechococcus sp. CC9605
Pathway
syd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
syd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Syncc9605_2066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syd03021
]
Syncc9605_2066
03400 DNA repair and recombination proteins [BR:
syd03400
]
Syncc9605_2066
Enzymes [BR:
syd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Syncc9605_2066
Transcription machinery [BR:
syd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Syncc9605_2066
DNA repair and recombination proteins [BR:
syd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Syncc9605_2066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
DUF7337
Fas_alpha_ACP
DUF333
Pkinase_fungal
Motif
Other DBs
NCBI-ProteinID:
ABB35806
UniProt:
Q3AHX6
LinkDB
All DBs
Position
complement(1886614..1888518)
Genome browser
AA seq
634 aa
AA seq
DB search
MTNSNLRTENHFDYVKITLASPDRVMEWGQRTLPNGQVVGEVTKPETINYRTLKPEMDGL
FCEKIFGPSKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFIKLAAPVSHVWY
LKGIPSYVAILLDMPLRDVEQIVYFNCYVVLDPGDHKDLKYKQLLTEDEWLEIEDEIYAE
DSEIENEPVVGIGAEALKQLLEDLTLDEVAEQLREEINGSKGQKRAKLIKRLRVIDNFIA
TNARPEWMVLDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPE
IIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDY
SGRSVIVVGPKLKMHQCGLPKEMAIELFQPFVIHRLIRQNIVNNIKAAKKLIQRADDEVM
QVLQEVIEGHPILLNRAPTLHRLGIQAFEPKLVDGRAIQLHPLVCPAFNADFDGDQMAVH
VPLAIEAQTEARMLMLASNNILSPATGEPIITPSQDMVLGSYYLTALQPGASKPDFGDRS
CTFAGLEDVIHAFEDNRIGLHDWVWVRFNGEVQDDEELDAPSKSESLSDGTRIEEWSYRR
DRFDEDGALISRYILTTVGRVVMNHTIIDAVAAA
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacagcaacctccgcaccgagaaccacttcgattacgtcaagatcaccctcgcc
tcacccgatcgggtgatggagtggggacagcgcaccctgcccaacggccaggtggtcggt
gaggtcaccaagccggagaccatcaactaccgcaccctcaagcctgagatggacgggctg
ttctgcgaaaagatctttggcccgtccaaagattgggaatgccactgcggcaagtacaag
cgggtgcgtcaccggggcatcgtttgtgaacgctgtggtgtggaggtcaccgagagccgc
gtgcgtcgtcaccgcatgggtttcatcaagctggcggcccccgtctctcatgtctggtac
ctgaaggggattcccagctacgtggccatcctgctggacatgcccctgcgggatgtggag
cagatcgtttacttcaactgctacgtggtgctggatccaggcgaccacaaggatctgaag
tacaagcagctgctcaccgaagacgagtggctggaaattgaagacgagatctacgccgaa
gattccgagatcgagaacgagcccgtggtgggcatcggtgccgaggccctcaagcaactg
ctggaagatctcaccctcgatgaagtggctgagcagctgcgggaggagatcaacggcagc
aagggtcagaagcgcgcaaagttgatcaagcgtctgcgcgtgatcgacaacttcatcgcc
accaacgcccgtcccgagtggatggtgctggatgtgatcccggtgattccgcccgacctg
cgcccgatggtgcagctcgatggtggtcgcttcgctaccagcgatctcaacgatctctac
cggcgggtgattaaccgcaacaaccgtctggcgaggctccaggaaatcctggcccctgaa
atcatcgtccgcaacgagaagcggatgctgcaggaggccgtcgatgccctgatcgacaat
ggccgtcgcggtcgcaccgtggtgggtgccaacaaccgtccgctcaagtcactgagcgac
atcattgaaggcaagcagggccgcttccgtcagaacctccttggtaagcgggtcgactac
tccggtcgttccgtgatcgtggtgggtccgaagctgaagatgcaccagtgcggtctgccc
aaggagatggcgatcgaactgttccagcctttcgtgatccaccgcctgatccgccagaac
atcgtcaacaacatcaaggcggccaagaagctgattcagcgggccgatgatgaagtgatg
caggtgctgcaggaggtgatcgagggtcacccgatcctgctgaaccgtgctccaaccctg
caccgtctcggcattcaggccttcgaacccaagctggtggatggccgcgccattcagctg
caccccctggtctgcccagccttcaacgctgacttcgacggtgaccagatggccgtccat
gtgcccctggccatcgaggcgcagaccgaggcccgcatgctgatgctggccagcaacaac
atcctgtcgcctgcgaccggcgagccgatcatcaccccgtcccaggacatggtgctgggc
tcctactacctgacggcgcttcaacccggtgcctccaagcccgacttcggcgatcgcagc
tgcacttttgcgggtctggaggatgtcatccatgccttcgaagacaaccggatcggtctg
cacgactgggtgtgggtccgcttcaacggtgaagttcaggacgatgaagagctggatgcg
cccagcaagagcgaatccctcagcgatggcacgcgcatcgaagagtggagctaccgccgc
gaccgtttcgatgaagacggtgccctgatcagtcgctacatcctcaccactgtgggccgc
gtggtgatgaatcacacgatcatcgacgcggtggccgccgcctga
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