Synechococcus sp. CC9605: Syncc9605_2067
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Entry
Syncc9605_2067 CDS
T00292
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
syd
Synechococcus sp. CC9605
Pathway
syd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
syd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Syncc9605_2067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syd03021
]
Syncc9605_2067
03400 DNA repair and recombination proteins [BR:
syd03400
]
Syncc9605_2067
Enzymes [BR:
syd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Syncc9605_2067
Transcription machinery [BR:
syd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Syncc9605_2067
DNA repair and recombination proteins [BR:
syd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Syncc9605_2067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
ABB35807
UniProt:
Q3AHX5
LinkDB
All DBs
Position
complement(1888567..1891860)
Genome browser
AA seq
1097 aa
AA seq
DB search
MSSSAIQVAKTATYLPDLVEVQRASFKWFLDQGLIEELESFSPITDYTGKLELHFIGSEY
RLKRPRHDVEEAKRRDATFASQMYVTCRLVNKETGEIKEQEVFIGELPLMTERGTFIING
AERVIVNQIVRSPGVYFKDEMDKNGRRTYNASVIPNRGAWLKFETDKNDLLHVRVDKTRK
INAHVLMRAMGLSDNDVLDKLRHPEFYKKSIDAANDEGISSEDQALLELYKKLRPGEPPS
VSGGQQLLQTRFFDPKRYDLGRVGRYKINKKLRLTIPDTVRTLTHEDVLSTLDYLINLEL
DVGGASLDDIDHLGNRRVRSVGELLQNQVRVGLNRLERIIKERMTVGETDSLTPAQLVNP
KPLVAAIKEFFGSSQLSQFMDQTNPLAELTHKRRISALGPGGLTRERAGFAVRDIHPSHY
GRLCPIETPEGPNAGLINSLATHARVNEYGFIETPFWKVEYGVVLKDGDPIYLSADREDE
VRVAPGDVATEDDGRISADLIPVRYRQDFEKVPPEQVDYVALSPVQVISVATSLIPFLEH
DDANRALMGSNMQRQAVPLLRPERALVGTGLETQVARDSGMVPISRVNGTVTYVDANAIV
VQDEDGNDHTHFLQKYQRSNQDTCLNQRPIVRCGDPVIVGQVMADGSACEGGEIALGQNV
LIAYMPWEGYNYEDALLVSERLVTDDLYTSVHIEKYEIEARQTKLGPEEITREIPNVAEE
SLGNLDEMGIIRVGAFVESGDILVGKVTPKGESDQPPEEKLLRAIFGEKARDVRDNSLRV
PGTERGRVVDVRIYTREQGDELPPGANMVVRVYVAQRRKIQVGDKMAGRHGNKGIISRIL
PREDMPYLPDGTPVDIVLNPLGVPSRMNVGQVFELLMGWAASNLDCRVRIVPFDEMHGAE
KSQQTVETFLKEAAKQPGKGWVYDPEDPGKLQLRDGRTGLPFDQPVAVGYSHFLKLVHLV
DDKIHARSTGPYSLVTQQPLGGKAQQGGQRLGEMEVWALEAYGAAYTLQELLTVKSDDMQ
GRNEALNAIVKGKPIPRPGTPESFKVLMRELQSLGLDIAVYTDEGKEVDLMQDVNPRRST
PSRPTYESLGVADYDED
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagcgcgattcaggtcgccaagaccgccacctacctccctgatctggtggag
gtgcagcgggccagctttaagtggtttttggatcaaggtctgatcgaggagctggaaagc
ttctctccgatcacggattacaccggcaagctggagctgcatttcattggtagtgagtac
cgcctgaagcgcccccgccacgatgtggaagaggccaagcgacgtgatgcgaccttcgcg
tcacagatgtacgtgacctgccgcctggtcaacaaggagaccggtgagatcaaggagcag
gaggtcttcatcggcgaactgccgctgatgaccgagcgcggcacgttcatcatcaacggc
gctgagcgcgtgatcgtgaaccagatcgtgcgcagccctggtgtctatttcaaggatgaa
atggacaagaacggtcggcgcacttacaacgccagcgtcatccccaaccggggtgcctgg
ctgaagtttgagaccgataagaacgacttgctccacgttcgtgtggacaagacccgcaag
atcaacgcgcacgtgctcatgcgtgccatgggtctctccgacaacgacgtgctcgacaag
ctgcgtcaccccgagttctacaagaagtcgattgatgccgcaaacgatgagggcatcagt
tcggaagaccaggcgctgcttgagctctacaagaaactgcgcccaggtgaacccccctca
gtgagtggtggtcagcagctgctgcagacccgtttcttcgatcccaagcgctacgacctc
ggtcgggtcggccgctacaaaatcaacaagaagctgcgcctcaccatccccgacacggtg
cgcaccctcacccatgaggacgtgctctcgaccctcgattacctgatcaacctggaactg
gatgtcggtggtgccagcctcgacgacatcgaccacctcggtaaccgccgcgtgcgttcc
gtgggcgaactcctgcagaaccaagttcgggtgggtttgaaccgtcttgagcggatcatc
aaggaacggatgaccgtcggcgaaaccgattcgctgaccccggcccagttggtgaacccc
aagcccctggtggcggcgatcaaggagttcttcggctccagtcagctgagccagttcatg
gaccagaccaaccctctggctgagctcacccacaaacgccgtatctcggcccttggaccc
ggcggtctcacccgtgagcgtgccggcttcgccgtccgcgacattcacccctcccactac
ggccgtctctgcccgattgagacgccagaaggtcccaacgccggtctgatcaactccctg
gccacccacgcccgggtcaacgagtacggcttcatcgaaacgccgttctggaaggttgag
tacggtgtcgttctcaaggacggcgatccgatctacctgtctgccgaccgggaagacgaa
gtgcgcgtcgcccctggtgacgtggccaccgaggacgacggccggatctcggcggatctg
attcctgtgcgttatcgccaggacttcgagaaggtcccccctgagcaggtcgactacgtc
gccctgtcaccagtacaggtgatctccgtggcaacgtccctgattcctttcctggagcac
gacgacgccaaccgcgccctgatgggctccaacatgcagcgtcaggctgtgccgttgctt
cgccctgagcgtgccctggtgggcaccggcctggaaacccaggtggcccgcgactccggc
atggtgccgatctcccgggtgaatggcaccgtcacctatgtggatgccaacgccatcgtt
gttcaggacgaggacggcaacgaccacacccacttcctgcagaagtatcagcgctccaac
caggacacctgtctgaaccagcgcccaatcgtccgctgtggcgatccggtgatcgtaggt
caggtgatggcggatggctcggcctgtgaaggcggtgagatcgccctgggtcagaacgtt
ctgatcgcttacatgccctgggagggttacaactacgaggacgcgctgctggtgagcgag
cgtctggtcaccgacgacctctacacctcggttcacatcgagaagtacgagatcgaagcg
cgtcagaccaagctgggacctgaggagatcacccgtgagatccccaacgtcgctgaggaa
agccttggcaacctcgacgagatgggcatcatccgcgtgggcgctttcgttgaaagcggc
gacatcctcgtcggcaaggtgacgcccaagggtgaatccgaccagccgccggaagagaag
ctgctgcgcgcgatcttcggtgagaaggcccgtgatgtgcgcgacaactccctgcgggtg
cccggcaccgagcgtggccgcgttgtggatgtgcgcatctacacccgtgaacagggtgat
gagctgccccccggcgccaacatggtggtgcgggtttatgtggcccagcgccgcaagatc
caggtcggcgacaagatggctggccgccacggcaacaagggcatcatcagccgcatcctt
ccccgagaggacatgccctatctgcccgacggcaccccggtcgacatcgtgctcaacccc
ctgggtgtgccgagccggatgaatgtgggtcaggtgttcgagctgctgatgggttgggca
gcgtccaacctcgattgccgcgtgcgcatcgttcccttcgatgagatgcacggtgctgag
aagtcccagcaaaccgtcgagaccttcctcaaggaagccgccaagcagcccggtaagggt
tgggtttacgacccagaggatccaggcaagctgcagctgcgggatggccgcaccggcctg
cccttcgaccagcccgtggccgtgggttactcccacttcctcaagctggttcacctggtg
gacgacaagattcacgcacgctccaccggcccctactccctggtcacccagcagcccctg
ggcggtaaggcacagcaaggtggtcagcgtctgggtgagatggaggtgtgggccctcgag
gcctatggcgccgcatacaccctgcaggaactgcttacggtcaagtccgacgacatgcag
ggccgcaacgaggccctcaacgccatcgtcaagggcaagccgatcccccgcccaggtact
ccggaatccttcaaggtgctgatgcgcgagcttcagtccctggggctggacatcgccgtc
tacaccgacgaaggcaaggaagtggatctgatgcaggacgtgaacccacgtcgcagcacc
cccagcaggcccacctacgaatccctcggcgtcgcggattacgacgaggactga
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