Synechococcus sp. CC9605: Syncc9605_2330
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Entry
Syncc9605_2330 CDS
T00292
Name
(GenBank) putative RND family outer membrane efflux protein
KO
K03287
outer membrane factor, OMF family
Organism
syd
Synechococcus sp. CC9605
Brite
KEGG Orthology (KO) [BR:
syd00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
Syncc9605_2330
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Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ABB36062
CyanoBase:
Syncc9605_2330
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Position
complement(2142461..2144245)
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AA seq
594 aa
AA seq
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MRRITASICLVAGVVSSGISPALGQDAPQVESASLDQSTLPDAIDLKGARPKADSSVLAP
AVDALPASLEPLAAPPSLALPDSPSQVRIRELRPVTLEEAIQLAEFNSPQLKASASQVDQ
AKSALRAAIAAWYPTVDLSASGLPEYFKSYSYRNPDFVPDRVVQKPTGQIDPTTGEEILR
PETRDGYKERYGREWRLNVGLKVSWDLINPARVPQIAAARDQFERARESYLIALRDLRLE
TSTAYFDLQEADEGVRIGQASVKASLVSLRDARARFNAGVNTKLEVLEAETQLARDRNLL
TTNLGQQSVSRRNLAVVLDLPQDVTPTAATPARPLGLWTPSLQESIVAAYNYREELDQLI
LDISINHSQANASLAAVQPVLSFVNSTTTSRTQGQTGQTSSDIDMGDFTYGIQNSMALTA
NWRLFDGGRARAEYRRSKQASEESRFNFARTRDQIRLEVEQSFFDLRTAIQNIDTTSSEV
LSSRESLRLSQLRVQAGVSTQREVVDNQRDLTNAELRYTGAIKAYNTSLAQLRRRTGLDA
LVSCNAVSLPATNQELEQPFIPIEPTPLKTACPSVATAGSSMNQNQDSPVQPLW
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
gtgcgccggatcaccgcgagtatttgtctcgtagcgggcgttgtttcctccggtatctca
cctgctcttggtcaagacgctcctcaggttgagtcggcctcgttggaccaatccacgctt
ccggacgcgatcgacttgaagggagcacggcccaaggccgattcctcggtcttagctcca
gcagtggatgctttgcctgcatccctcgaaccgctggctgccccccccagccttgccctt
ccagattcgccgtctcaggtgcgcatccgtgaactgcgcccggtcaccctggaagaagcc
attcagctggccgagttcaacagcccccaactcaaggcttcagccagccaggttgatcag
gccaagtctgcgctccgtgcagccattgctgcttggtatcccaccgtcgacctatcggcc
agtggacttcccgaatacttcaagtcgtactcctaccgaaatccagatttcgttcctgat
cgggtcgttcagaaacccacaggccagatcgaccccactactggtgaagagatcctcagg
cccgagactcgggatgggtacaaagaacgttacggccgcgaatggcgtctcaacgtcggc
ttgaaggtgagttgggatttgattaatcccgcacgggttcctcagatcgccgcagctcgt
gatcaatttgaaagggcgcgagagtcttacctgattgccttacgtgatcttcgtttggag
acctcgacggcctatttcgatttgcaggaagcagatgaaggtgtgcgtattggtcaggct
tctgtcaaagcgtcactggtcagcctccgtgatgcacgggctcgcttcaacgcgggggtt
aataccaagttggaagttttggaggctgagactcaactggcccgtgaccgcaatctgctg
acgaccaatctcggtcaacaatcagtgtcgcgtcgcaacctcgctgtcgtactcgacctc
ccccaggacgtcactcccacggcggcaacgcctgcgcgacctttgggcttgtggacccca
tcacttcaagaaagcatcgttgcggcttacaactatcgcgaggagctcgatcaactgatc
ctcgatatatcgatcaaccacagccaggcgaatgcgtctttagctgctgttcagcctgtg
ctcagtttcgtgaattccaccacgacctcccgtacccaaggccaaaccgggcagacgtcg
agcgacattgatatgggcgacttcacctatggcattcagaacagcatggcgttgacggcg
aattggcggttgtttgatggtggtcgcgccagggccgaataccggcgttccaagcaggcc
tctgaagagagccggttcaatttcgcgagaacccgtgatcagatccggcttgaggttgag
caaagcttttttgatctgcgaacagctatccagaacatcgacaccacatcgagcgaagtc
ctctcatcgcgggaatccctgcgcttgtcacaactgcgggttcaggccggcgttagcacc
caacgggaagtggtcgataaccagcgcgatctcaccaacgccgagcttcgctatacgggt
gccatcaaggcctacaacacgagcctggcgcagctgagacgtcgaacaggattggatgct
cttgtgtcctgtaatgcggtttcactgccggccaccaaccaggaacttgaacaaccgttt
attccgattgagcccacgccgcttaagaccgcttgcccatcggtggctaccgcaggttca
tcgatgaaccaaaatcaggacagtcctgttcaacctctgtggtga
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