Synechococcus sp. CC9605: Syncc9605_2520
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Entry
Syncc9605_2520 CDS
T00292
Name
(GenBank) DEAD/DEAH box helicase-like
Organism
syd
Synechococcus sp. CC9605
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
DEAD
ResIII
AAA_22
Lyase_8_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
ABB36250
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Position
2330541..2333738
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AA seq
1065 aa
AA seq
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MSLLHATWLPAIRTSSSSGQPALLVWADTWRVATPEGPGLTPALHPFTLSHEDLRAWLSE
RDLLPGGCIDATACLTLPSRTVKLRKSRSTKEEPTPEPPGWTGLPMQAGEPIPKQTEWWP
WQVQGLAVEPSAATEWLSRLPLSGTNPDLADELRWWSHLQRWALSLVARGRWIPQMEFSK
GEGYPHRARWVPLLNREEDRRRLEDLAASLPLVATCALPWREPLGRRSNRTTRLRPEAMR
AANPVASCRPRSGRLRVATLLEDLVDAQLRKDFEPSTDGLDPLLTLWQEALGSETGVIEI
GDEEAERLATASHHWREGIAGDFAAARTCLELHTPPDGEDLWELRFGLQAEADPSLKLPA
AAAWAAGAEPLQLGEIRVDQPGEVLLEGMGRALSVFPAIERGLESATPETMQLTPAEAFV
LVRTAARQLRDAGVGVELPPSLSGGLASRLGLSIKAELPERSSGFTLGECLAWEWDLMIG
GVTLTLRELERLSGKRSPLVRHKGAWIELRPNDLKNAERFCGAKPELSLDDALRLTGTEG
ELLMRMPVHRFDAGPRLQSVLQQYHQQKAPDPLPAPEGFSGQLRPYQERGLGWLAFLHRF
DQGACLADDMGLGKTIQLLAFLQHLKAEQELKRPVLLVAPTSVLTNWRREAESFTPELKV
TEHYGPRRPSTPAELKKALKEVDLVLTSYGLLQRDSELLETQDWQGVVIDEAQAIKNPGA
KQSQAARDLARTGRIKSNRFRIALTGTPVENRVSELWALMDFLNPKVLGEEDFFRQRYRM
PIERYGDMSSLRDLKGRVGPFILRRLKTDKTIISDLPEKVELSEWVGLSKEQKSLYSKTV
EDTLDAIARAPRGQRHGQVLALLTRLKQICNHPALALSEGAVDDGFLGRSAKLQRLEEIL
DEVIEAGDRALLFTQFAEWGHLLRAWMQQRWKSEVPFLHGGTRKNERQAMVDRFQEDPRG
PQLFLLSLKAGGVGLNLTRASHVFHIDRWWNPAVENQATDRAYRIGQTNRVMVHKFITSG
SVEEKIDRMIREKSRLAEDVIGSGEDWLGSLGGDQLRDLVSLEDT
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgcacgccacctggcttcccgccatccgcacctccagcagttccggtcaa
ccggcactgctcgtttgggctgacacctggcgggtggccacaccggaaggcccgggcctt
accccagcgctgcaccccttcaccctaagccatgaagacctcagggcctggctgagcgaa
cgcgacctcttgcccggcggctgcatcgatgccacggcgtgcctcaccctgccgagccgc
acggtgaagctgcgcaaaagccgcagcacaaaagaggagccaacaccggaaccaccgggt
tggaccgggctaccgatgcaggccggcgaaccgatccccaagcaaaccgaatggtggccc
tggcaggtgcaggggctcgcggtggaaccgtcggcagccacggagtggctgtcccgattg
ccgctctccggcaccaatccagacctggctgatgaactgcgctggtggagccatctgcag
cgctgggccttgagtctggtggcccggggccgctggattccccagatggagttcagcaaa
ggggagggctatccccatcgggcccgttgggtgccgcttctcaaccgggaagaagaccgg
cgccggctggaggatctggcggccagcctgccgctggtggccacctgcgccttgccctgg
cgggaacccctggggcgccgcagcaaccgcaccacccggttacgaccggaggcgatgcga
gccgccaaccctgtggccagctgccggccccgcagcggacgcctgcgggtggcgacgctg
ctggaagatctagtggacgcgcagctgcgcaaggactttgaaccctccaccgatgggctt
gatcccctgctgaccctctggcaggaggccctggggtcggagaccggggtgatcgagatc
ggcgatgaagaggccgaacgcctggccaccgccagccatcactggcgggagggcatcgcc
ggcgattttgctgcggcccgcacctgccttgaactgcacaccccaccggatggggaggat
ctctgggagctgcgcttcgggctgcaggcggaagctgaccccagcctgaagctcccggcc
gccgcggcctgggcggctggtgcggaaccgctacagcttggagagatccgggtggaccaa
ccgggtgaagtgctgctggaaggcatgggccgcgccctgagcgtgtttccggcaattgag
cggggtctggagagcgccacacctgaaacgatgcagctcaccccggccgaggccttcgtg
ctggtgcgcacggccgcccggcagctgcgggatgccggcgtgggagtggagctgccgccc
agcctctccggtggcctggccagccgactgggcctgtcgatcaaagcggaactgcccgaa
cgctcgagcggtttcacgttgggtgagtgtctggcctgggagtgggatctgatgatcggc
ggggtgacgctcaccctgcgggaattggagcgcctgagcggcaagcgcagccccctggtg
cgccacaagggggcctggatcgaactgcggcccaacgacctcaaaaatgccgaacgcttc
tgtggggcgaaacctgaactgagcctcgacgacgcgctgcggctgacggggacggaaggg
gaactgttgatgcggatgccggtgcaccgcttcgacgccggcccacggctgcaatcggtg
ttgcagcaataccaccagcagaaggcccccgaccccttgccggccccggaaggattcagc
gggcagctgcggccttatcaggagcggggcctcggctggctcgccttcctgcaccgcttc
gatcaaggggcctgtctagctgacgacatgggcttgggcaaaaccattcagttgctagcg
ttcctgcagcacctcaaagcggagcaagaactgaaacgcccggtgctgctggtggccccc
acatcggtgctcaccaactggcgacgggaggcggaatcgttcactccagagttgaaggtc
accgagcattacgggcctcgccggccctccacacccgccgaactcaaaaaagcgttgaag
gaggtggatctggtgctcaccagctacgggctgctgcagcgtgacagcgaactgctggaa
acccaggactggcagggggtggtgattgacgaagcccaggcgatcaagaaccctggcgcc
aaacagagccaagccgcccgggatctggcccgcaccggccgcatcaagagcaaccgcttc
cgcatcgcactcaccggcacccccgtggaaaaccgggtgagcgaactgtgggccttgatg
gacttcctcaacccaaaggtgcttggggaagaagacttcttccgccagcgctatcggatg
ccgattgagcgctacggcgacatgtcgtccctgcgggacctgaaaggccgcgtgggtccg
ttcatcctgcgccggctgaaaaccgacaagacgatcatttccgacctgcctgaaaaggtg
gagctgagcgaatgggtggggctgagcaaggagcagaaatctctgtacagcaagaccgtg
gaagacaccctcgatgccattgcccgggcgccgcgcgggcagcgccacgggcaggtgctg
gccctgctcacccggctgaaacagatctgcaaccatcccgccctggccctgagcgaaggg
gccgtggacgatggcttcctgggccgttcggccaagctgcagcggctggaggagatcctc
gatgaggtgatcgaagcgggcgatcgggccctgctgttcacccagttcgccgaatggggg
catttgctaagggcctggatgcagcagcgctggaaatcagaagtgcccttcctgcacggc
ggcacccgcaagaacgaacgccaggcgatggtggatcgcttccaggaggatccccgcggt
ccacagctgttcctgctctcgctcaaggccggtggtgtgggcctcaacctcacgcgggcc
agccatgtgttccacatcgatcgctggtggaaccctgccgtggaaaaccaggccaccgac
cgggcctatcggatcggccaaacgaaccgagtgatggttcataaattcatcaccagcggt
tcggtggaggaaaaaatcgatcgcatgatccgcgagaaatcacgcctggccgaagatgtg
atcggctccggcgaagattggctgggaagcctcggtggcgatcaattgcgcgatctcgtt
tctttggaggacacctga
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