Synechococcus sp. CC9605: Syncc9605_2527
Help
Entry
Syncc9605_2527 CDS
T00292
Name
(GenBank) Type I secretion system ATPase, HlyB
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
syd
Synechococcus sp. CC9605
Pathway
syd02010
ABC transporters
syd03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
syd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Syncc9605_2527
03070 Bacterial secretion system
Syncc9605_2527
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syd02000
]
Syncc9605_2527
02044 Secretion system [BR:
syd02044
]
Syncc9605_2527
Transporters [BR:
syd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Syncc9605_2527
Secretion system [BR:
syd02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Syncc9605_2527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
cNMP_binding
ABC_ATPase
AAA_22
AAA_21
AAA_16
DUF87
AAA_29
AAA_30
ABC_membrane_3
Zeta_toxin
nSTAND1
RsgA_GTPase
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ABB36255
LinkDB
All DBs
Position
complement(2341328..2344258)
Genome browser
AA seq
976 aa
AA seq
DB search
MTQTPSFPLLEHPAFCGVSDASVSRLERECNVLRFDLGGQLSDPNEIPARILVILQGQAR
LVGRHNGRLTTVGKFGPGSVIGAASLLACSPCENVIAAEEVIACGISDELWRELYATEAS
FRHWCDQQLWPQELLKLLEALEQNTPEVESSALEKLEDALQTAERCSPDPAAVDAALAAG
KLLFVTSAWGELTFGQPIRSSVDLPVCEPFSLRLVALPASGVSDKAQETMDDSSGSRVSA
SSIQDAEVLPPVSSFSPERNVVDSLRLIRADGSLQETLACFQMLAQLMKLPFRRDAIEKV
LQDNLRRGLAPNLQLCGQLAASLGLHVMASRVPARAGTRLQVPSMLPWHGGFALAIASNE
RGLKLASPNQGIVTLAPDDLAEQFPEGIELLLMERSNSSPDQTFGPGWFWPALKRYRVVL
IQVLAASFVVQLFTLANPLLIQVIIDKVISQRSLDTLQVLGIALVVVTILEGVLGSLKTF
LFAETTNRIDQRLGAEVIDHLLRLPLGYFDRRPVGELGTRVAELEKIRNFLTGQALTTIL
DAAFSVIYIAVMLIYSWLLTLIALSVLPIQIGLTMLGAPLFRRQFRAAAEENAKTQSHLV
EVLTGIQTVKAQNVEMVSRWRWQGFYSQYIARTFEKTITGTALNQTSQVLQKISQLMVLW
IGASMVLNGDLTLGQLIAFRIISGYVTQPLLRLSTIWQNIQELRVSFERLADVIDTPEES
DEVDKSKVMLPPLHGDVRFEKLSFRFRPGQPQVLKEVNLEIPAGTFVGIVGQSGSGKSTL
MKLLPRLYAPEEGRILIDDYDIGKVELYSLRRQIGIVPQDPLLFSGSVSDNIALTNPEAS
SEEIVRAARLANAHDFIMDLPSGYSTPVGERGAALSGGQRQRVAIARTLLSNPKLLVMDE
ATSALDYETERKVFDNLLSSLNDRTVFFITHRLSTIRQADMIVMLHQGAVVEIGTHDDLI
SQRGRYYALYRQQESS
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgacccagacaccgtcttttcctttgttggagcatccggcgttctgtggcgtctccgac
gcctcggtctccaggttggagcgtgaatgcaacgtgttgcgttttgatctcgggggtcag
ttgtctgatcccaatgagatccctgctcggatcctggtcatcctccaaggccaggccagg
ctggtcggacgtcacaacggccgactcaccacggtgggcaagttcggcccgggcagtgtg
atcggagcggccagccttctcgcatgttccccctgcgagaacgtgattgccgctgaggaa
gtgattgcctgcggcatctctgatgagctgtggcgtgagctctacgccacggaagcctca
ttccgtcactggtgtgatcaacaactctggccccaggagctgctcaagctgctggaagct
ctggagcagaacaccccggaagtcgagagttctgccctcgaaaagctcgaggatgctttg
caaaccgcagagcgttgttctcctgaccccgcggcggtggatgcggctctggcggctggg
aagctcctcttcgtcacaagtgcctggggtgagctgacgttcggtcagcccatccgttca
tccgtggatctgccggtttgtgagccgttttcgctgcggttggtggctctgccggcctct
ggggtttccgataaagcccaagaaacgatggacgacagctctggctcacgcgtctcagct
tcgtccatccaggacgcagaggtgctgccccccgtcagcagcttcagtcctgagcgcaat
gttgtcgatagcctgcgtttgattcgggccgatggttcgcttcaggaaaccctggcctgt
ttccagatgctggcgcagctgatgaagctgccgttccgccgtgatgcgatcgagaaagtc
ctgcaggacaacctccgccgcggtcttgcccccaatctccagctctgtggtcagctggcg
gcaagccttggactgcatgtgatggcgtcacgggtgccggctcgtgccggcacccggctg
caggtgccgtcaatgctgccctggcatgggggattcgcgctggcgattgccagcaatgag
cgggggctcaagctggcctcgcccaaccagggcattgtgaccttggcgccggatgatctg
gccgagcagttccctgaggggatcgaactgctgttgatggaacgatccaacagcagcccc
gaccagacatttggccccggttggttctggcccgccctgaagcgctaccgcgtcgtgctg
attcaggtgttggccgccagttttgtggtccagctgttcacactggccaacccgttgttg
atccaggtgatcattgacaaggtgatcagccagcgcagcctcgacaccttgcaggtgctg
ggcattgcccttgtggtcgtcacgatcttggaaggggtgctcggcagcctcaagaccttt
ctgtttgctgaaaccaccaaccggatcgatcagcgcctcggggctgaggtgatcgatcac
ctgttgcgtctgcccctgggctatttcgaccgtcgccctgtgggtgaactcgggacacgg
gtggccgaactggagaagatccgcaacttcctcaccggtcaggccctcaccaccatcctc
gatgccgccttttccgtgatctacatcgcggtgatgctgatctacagctggcttctcacc
ttgatcgccctttcggttctgccgatccagataggtttgaccatgctgggggcccccctc
ttccgccgtcagtttcgtgctgccgcagaagaaaacgccaagacccagagccatctggtg
gaggtgctcaccggcattcagacggtgaaggcccagaacgtggagatggtcagccgctgg
cgctggcaggggttttattcgcagtacatcgctcgcaccttcgagaaaacgatcaccggc
acagccctgaatcagaccagccaggtgctgcagaagatttctcagctgatggtgctctgg
atcggtgcctccatggtgctgaatggcgatctaacccttggccagctgatcgcattccgg
atcatctctgggtacgtcacccagcccttgctccgtctgtccacgatctggcagaacatc
caggaactgcgcgtcagctttgagcggctggcggatgtgattgatactccggaggaatcc
gatgaagttgataaatcgaaggtgatgctgccgccgctccacggagatgtgcggtttgaa
aagctctcgttccgatttcgtcccgggcagccccaggtgctcaaggaggtgaatcttgag
atccctgctggcacctttgtgggcattgtcggccagagcggcagtggcaagagcacgttg
atgaaactgctgcctcggctttatgcgccagaggaaggccggatcttgattgacgactac
gacattggaaaggtcgagctgtattccctgcgtcgtcagatcggcatcgtcccccaggac
cctctgttgttcagcggaagtgtgagcgacaacattgcgctcaccaacccggaagcctcc
agtgaggagatagtgcgggccgcacgtctcgccaatgcccacgacttcatcatggatctg
cccagtggctacagcacccctgtgggtgaacggggtgcagcactcagtgggggccagcgg
cagcgggttgcgatcgcccgcaccttgctcagcaacccgaagctactggtgatggacgag
gccacaagcgccctcgactacgagaccgaacggaaggttttcgacaaccttctcagcagc
ctcaacgaccgcaccgtctttttcatcacccatcgtctttcgactattcgccaggccgac
atgatcgtgatgcttcaccagggagctgttgttgagatcggcacccacgacgacttaatc
agccagcgcggtcgctactacgccctttaccgccagcaagagagttcctga
DBGET
integrated database retrieval system
