Synechococcus sp. CC9605: Syncc9605_2664
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Entry
Syncc9605_2664 CDS
T00292
Name
(GenBank) type II alternative RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
syd
Synechococcus sp. CC9605
Brite
KEGG Orthology (KO) [BR:
syd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Syncc9605_2664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syd03021
]
Syncc9605_2664
Transcription machinery [BR:
syd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Syncc9605_2664
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
ABB36389
LinkDB
All DBs
Position
2474971..2475957
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AA seq
328 aa
AA seq
DB search
MGIPLESSATTKQSSRKEPALPSTGRRPSTRQGGRLATDSIGFYLSSIGRIPLLTAAEEI
ELAHHVQAMKQLQELPEEELTSRHRHKIRMGKRARDRMMAANLRLVVSVAKKYQNQGLEL
LDLVQEGAIGLERAVDKFDPAMGYKFSTYAYWWIRQGMTRAIDNSARTIRLPIHISEKLS
KMRRISRELSHRFGRQPNRLELASAMGIEPRELEDLISQSAPCASLDAHARGEEDRSTLG
ELIPDPNGEEPMEGMDRSIQKEHLGGWLSQLNEREQKILKLRFGLGGEEPLTLAEIGRQI
NVSRERVRQLEAKAILKLRAMTNHQQAA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggggatccctctggaatcttccgccacgacaaaacagtcgtcccggaaagaacctgcg
ttgccgtccaccggacgtcgaccatcgactcgacaaggagggcggcttgccactgactcc
attggtttttatctgagcagcatcggacgcattcccttgctgacggcagctgaagagatc
gaacttgcacaccatgtgcaagcgatgaagcaacttcaggagctaccggaagaggagctg
acctcccggcatcgccacaagatccgcatgggcaaacgggcccgcgacaggatgatggcc
gccaacctccgcctcgtggtgagcgtggcgaagaaataccagaaccagggcctggagctg
cttgatctggttcaggaaggagccatcggcctcgagcgagcggtcgacaagttcgacccc
gcgatgggctacaaattctccacctatgcctattggtggattcgccaaggcatgacgcgg
gccatcgacaacagcgcccggaccattcgtctgccgatccacatcagtgaaaagctctcc
aagatgcgtcgcatctcacgggagctgtcccaccgattcggtcgtcaaccgaatcggctg
gaactggccagcgccatgggcatcgagccccgggaactggaggatctgatctcccagagc
gcaccttgtgcatccctggatgcccacgcccgtggcgaagaagatcgcagcacccttggc
gaattgatccctgatcccaacggtgaagagccgatggaggggatggatcgcagcatccag
aaggaacatctgggcggctggttgtcgcagctgaacgaacgcgagcagaagattctgaag
ttgcggttcggtctcggcggtgaagagcctttgacccttgcggagatcggtcgtcagatc
aatgtgtcccgtgagcgcgttcgacagctcgaggccaaggcgattctcaagctgcgcgcc
atgaccaaccaccaacaagccgcctaa
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integrated database retrieval system
