KEGG   Synechococcus sp. CC9605: Syncc9605_2691
Entry
Syncc9605_2691    CDS       T00292                                 
Name
(GenBank) excinuclease ABC, A subunit
  KO
K03701  excinuclease ABC subunit A
Organism
syd  Synechococcus sp. CC9605
Pathway
syd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:syd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Syncc9605_2691
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:syd03400]
    Syncc9605_2691
DNA repair and recombination proteins [BR:syd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Syncc9605_2691
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Syncc9605_2691
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran AAA_29 SMC_N AAA_16 RsgA_GTPase nSTAND1 AAA_21 AAA_33 nSTAND3 NACHT AAA_22 DnaJ_CXXCXGXG Viral_helicase1 ATPase MeaB cobW
Other DBs
NCBI-ProteinID: ABB36416
LinkDB
Position
complement(2502063..2505026)
AA seq 987 aa
MARAAAKIADSAGPLATQDDVIRVRGARQHNLKNVDVTIPRNKLVVFTGVSGSGKSSLAF
DTIFAEGQRRYVESLSAYARQFLGQVDKPDVDAIEGLSPAISIDQKSTSHNPRSTVGTVT
EIQDYLRLLFGRAGEPHCPKCGRSIKPQSIDEMVDQILLLPEGTRYQLLSPVVRGKKGTH
TKLISGLAAEGFARVRINGEVRELADNIELDKNHSHNIEVVVDRLVAREGIQERLTDSLR
TALKRGDGLALVEVVPKKGEELPEGVERERLYSENFACPVHGAVMEELSPRLFSFNSPYG
ACEACHGIGHLRKFTVDRVIPDPTQPVYSAVAPWAEKDNSYYFSLLYSVGEAFGFEIKTP
WNELTDEQRDVLLNGSREPILIQADSRYRKGQGGYTRPFEGILPILERQLRDASGEAQRQ
KLEKYLELVPCEACGGQRLRPEALAVKVGPYRIPELTAVSVSQTLERIEKLMGVGAYEGS
EPLLNARQIQIGDLVLREIRLRLKFLIDVGLDYLSLDRPAMTLSGGEAQRIRLATQIGAG
LTGVLYVLDEPSIGLHQRDNDRLLNTLVRLRDLGNTLVVVEHDEDTIRAADHVVDIGPGA
GVHGGHIVAEGSFDDLVASSESLTGAYLSGRRSIPTPAERRQSGSRSLKLIDCNRNNLKN
VSVEFPLGRLVSVTGVSGSGKSTLVNELLHPALENGLGLKVPFPQGLGELRGLKSIDKVI
VIDQSPIGRTPRSNPATYTGAFDPIRQVFAATVEAKARGYQVGQFSFNVKGGRCEACRGQ
GVNVIEMNFLPDVYVQCDVCKGARFNRETLQVKYKGYTIADVLQMTVEQAAEVFDAIPQA
ADRLRTLVDVGLGYVKLGQPAPTLSGGEAQRVKLATELSRRATGKTLYLIDEPTTGLSFY
DVHKLMDVMQRLVDKGNSIICIEHNLDVIRCSDWIIDLGPEGGDKGGEILVTGTPEEVAQ
HPTSHTGRYLARVLEQHPPEVPVPLAA
NT seq 2964 nt   +upstreamnt  +downstreamnt
atggcgcgagctgctgccaagatcgctgactcagctggcccgctggcgactcaggacgat
gtgattcgagtgaggggtgcccggcagcacaacctcaagaacgtcgacgtcaccattccc
cgcaacaagctggtggtattcaccggggtgagtggcagcggcaagagttcactcgccttc
gacacgatttttgcagagggacagcgccgctacgtcgaaagtttgtcggcctatgcccgc
cagtttctggggcaggtggacaagcccgatgtcgatgccatcgagggcctgtctccggcg
atttcgattgatcagaaatccaccagtcacaacccccgttccacggtcggcaccgtcacg
gagattcaggactatctccgtctgctgttcggccgtgccggcgagccccactgccccaag
tgtggccgttcgatcaagccgcagagcatcgacgaaatggtcgatcagatcctgctgttg
ccggagggaacccgctatcagttgttgtcgccggtggtgcgcggcaagaagggcacccac
accaagttgatcagtggtttggcggcggaaggtttcgctcgggtgcgcatcaacggtgag
gtgcgcgagctggccgacaacatcgagctcgacaagaaccacagccacaacattgaggtg
gtggtcgatcgtcttgtggcccgtgaggggatccaggaacggctgaccgattcgttgcga
acggccctcaaacgcggcgatggtctggcattggtggaggtggtgcccaagaagggggag
gagcttcccgagggcgttgagcgggagcgtctctactccgagaacttcgcctgccccgtg
cacggcgctgtgatggaggagctgtcaccgcggctgttttcgttcaacagcccttacggc
gcctgtgaggcatgccatggcatcggccatctgcgcaaattcaccgtggaccgtgtgatt
ccggatccaacgcagccggtgtattccgcggtcgctccctgggccgagaaagacaacagc
tactacttctctctgctgtattcagtgggtgaggccttcggctttgagatcaagacccca
tggaatgaactcacggatgaacagcgggatgtgctgctcaacggaagccgcgaaccgatt
ctgatccaggccgacagccgttatcgcaaggggcaagggggatatacccggcccttcgaa
ggcattcttccgatccttgagcggcagctccgcgatgccagtggtgaagcccagcgccag
aagttggagaagtatctcgagctggttccctgtgaagcctgtggcggacaacggctccgc
cctgaagccctggcggtgaaagtggggccgtaccggattccagaacttacggccgtcagc
gtcagtcagaccctggaacggatcgaaaaactgatgggtgtgggcgcctacgagggttca
gagcccttgctgaatgcccgtcagatccagatcggtgatctggtgctcagggaaatccgc
cttcgtttgaaattcctgattgatgttggtctcgattacctgagccttgatcgaccggcg
atgacgctctccggcggtgaagcccagcgcatccgtctggcaactcagatcggtgctggt
ctcactggagtgctgtatgtgctcgatgagccaagcatcggcctgcatcagcgggataac
gaccgtctcctaaacaccctggttcggctcagggatcttggaaacaccttggtggtggtg
gaacacgatgaagacaccattcgtgctgccgatcacgtggtggacatcggccctggtgct
ggtgtccacgggggccacatcgtggcggagggaagtttcgatgatctggtggcaagcagt
gaatcgctcaccggcgcttacctgagtggccgtcgctcgattccaacgccagctgaacgt
cgccagagcggttcgcgctcgctcaagttgatcgattgcaaccgcaacaatctcaagaac
gtttcggttgagtttcccttgggtcggttggtgtccgtcaccggggtgagtggcagcggc
aagagcaccctggtgaatgagctcctgcacccggctcttgagaacggactgggtctcaaa
gtgccctttccccagggtctgggtgaactgcgggggttgaagtcgatcgacaaggtgatc
gtgatcgaccagagcccgattggacgcacgccccgctccaatccagccacctacaccggt
gcttttgatccgatccgtcaggtgttcgccgccacggtggaggccaaggcccgcggttac
caggtgggtcagttcagtttcaacgtgaagggtggccgctgtgaggcctgccgtggtcag
ggcgtgaacgtgattgagatgaacttcctgccggatgtgtacgtccagtgcgatgtctgc
aagggcgcccgcttcaaccgcgaaaccctgcaggtgaaatacaagggctacaccatcgcg
gatgtgctgcaaatgacggtggagcaggccgctgaggtgtttgatgcgattcctcaggcg
gcagatcgcttgcgcaccttggtggatgtgggcctgggctacgtaaagctcggccagccg
gcgccaaccctctcggggggtgaggcccagcgggtgaagcttgcaacggagctgtcacgg
cgggccactggcaagaccctttatctgattgatgagcccaccactggcctcagcttctac
gacgtgcacaagctgatggatgtgatgcagcgtcttgtggacaagggcaattcgatcatc
tgcatcgagcacaaccttgacgtgatccgttgcagcgactggatcatcgatctcggcccc
gaaggcggtgacaagggtggcgagatcctggtcactggcactcccgaggaagtcgcccag
caccccaccagtcataccggccgctatctggctcgagttttggagcagcatcccccagaa
gtgcccgttccattggcggcttga

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