Synechococcus sp. CC9902: Syncc9902_0005
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Entry
Syncc9902_0005 CDS
T00293
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sye
Synechococcus sp. CC9902
Brite
KEGG Orthology (KO) [BR:
sye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sye03032
]
Syncc9902_0005
03400 DNA repair and recombination proteins [BR:
sye03400
]
Syncc9902_0005
Enzymes [BR:
sye01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Syncc9902_0005
DNA replication proteins [BR:
sye03032
]
Prokaryotic type
DNA Topoisomerases
Syncc9902_0005
DNA repair and recombination proteins [BR:
sye03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Syncc9902_0005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
TR61B_FKBP-like
DDE_Tnp_IS66
Motif
Other DBs
NCBI-ProteinID:
ABB24980
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Position
complement(5990..8410)
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AA seq
806 aa
AA seq
DB search
MQRSYLEYAMSVIVGRALPDARDGLKPVQRRILYAMQELGLTPDRPYRKCARVVGDVLGK
YHPHGDQAVYDALVRLVQTFASRHPLLDGHGNFGSVDDDPPAAMRYTETRLAPIAHQALL
EEIGDDTVDFASNFDGSQQEPTVLPAQLPFLLLNGCSGIAVGMATSIPPHNLGEVVDGLI
ALIRQPGLSDERLLELIPGPDFPTGGEVLLSSGLQDTYLQGRGSIPMRGVAHTEEVQLGK
GRHKRNAVVVTELPYQLSKAGWIEKLAESVNDGKIGGIADIRDESDRDGMRVVVELRRDA
EPEKVLKDLQRRTALQSNFGAILLALVNGQPQQLSLRQLLQTFLDYRELTLIRRTSHALR
KTEDRLEVVEGLITALNNLQAVIAMIQEAKDAASARASLMVRLDLNERQADAVLAMPLRR
LTGLEQESLRQEVDNLRNEKERLKLLLENRDQLLDAMVAELKTLKKRFSTPRRTRLVEGG
DALIAERAASQRPNTELLRQQALAALPGDGRLLIQADGQVKIVTPQVLGRLHFGDPCPVS
DAPSPARVILPIEPPPRLLAISANGRVALVRWEFAGQQPGALERFLPSGLEGEPIVAIAP
LPMQESSDLSLGLLSSDGRFKRLPLAEVLELSGRATSVVKLKDGVQLKAAVICHEHHDLI
LVSDIGRMLRLPINEDVLPRMGRLAQGPMTMRLLPGEHLIGALCPTKPTALLVSEQGRLA
RIDLTSIRSSQRGDLGSMAIQLVGDTDRITGLTEASGLIGMVSTEQRHGRIDPTTLEITN
PGEEFSNQIELHQGETITDLIPQISG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgctcctacctggaatacgcgatgagcgtgatcgtgggtcgggccttgcccgat
gcccgcgacggtctcaagccggtgcagcgtcgaatcctgtatgcgatgcaagaactgggg
ttaaccccagatcggccctacagaaaatgcgctcgtgttgttggcgatgttctcgggaaa
taccatccccacggagatcaggcggtctacgacgcactcgtacgactggttcaaaccttt
gctagccgacatcctctgttggatggacatggcaatttcggatcggttgatgacgatccg
ccagccgcgatgcgttacaccgaaacgcgtcttgctccgattgcccatcaagctctgctg
gaagaaatcggtgatgacaccgtcgactttgcatcgaacttcgatgggtctcaacaagaa
ccaactgttctccccgcacaactccccttccttctcctcaatgggtgttctggcatcgcc
gttggcatggccacgagcatcccaccccacaacttgggtgaggtggtggacggcctcatt
gctctgattcgacaaccaggactgagcgacgagcgccttttagaactcattcctggccct
gattttccaaccggtggggaagttttactcagttcaggcctccaagacacctacctccag
ggccgcggcagtatcccaatgcggggtgtagcgcacacagaagaagtgcagctgggtaag
ggacgccacaaacggaacgccgtagttgtaaccgaactgccctatcaactcagcaaagcg
ggctggatcgaaaaactggctgaatcggtgaacgacggaaaaattggcggcatcgctgac
atccgcgatgaaagcgatcgagatggcatgcgggttgtagtggaacttcgccgcgatgct
gaacccgaaaaagttctcaaggacctccaacgccggaccgcattgcagagcaatttcggt
gcaatcctgctcgcccttgtcaacggtcagccccagcagctctcactgcggcagctcctc
caaacctttctcgactacagggaactcaccctgattcgacgcacaagccacgccctccgc
aaaacagaagatcgcctggaagtggtggagggcctgatcacggctctgaacaaccttcaa
gccgtgatcgcgatgatccaagaagccaaagatgctgcctccgctcgcgccagcttgatg
gtgcgattggacctcaacgagcgccaggctgatgccgtgttggcgatgccgctccgtcgc
ctaacaggactggaacaggaaagcttgcgccaagaggtcgacaacctgcgaaacgagaaa
gagcgtttgaaattgctgctcgaaaaccgagatcagttgctggacgccatggttgcagaa
ctaaaaacactaaaaaaacgcttctccactccacgtcgcacacgactggtggaaggcggg
gatgccttgatcgcagaacgagctgccagtcaaagacccaatacggagcttctccgtcag
caagccctagctgctctccccggtgatggtcgactgctaatccaagccgacggacaagtg
aagatcgtgaccccacaggtgctgggtcgtcttcattttggtgatccttgtccagtaagc
gatgccccttcacctgctcgggtaatccttccgatcgaaccgccaccgcgacttctcgcc
attagtgccaatggtcgtgttgccctcgtgcgttgggagtttgccggacaacaaccagga
gcattggaacgattcctacctagcgggttggaaggtgaaccgatcgtggcgatcgctccc
ctaccaatgcaagagagcagtgacctcagccttggcttgctgagcagcgatggacgcttc
aaacgactgccactcgcagaagtcttggaattatctggacgcgccaccagcgttgtgaag
ctgaaagacggcgttcaactcaaagccgctgtgatttgccatgagcaccacgatctgatc
ttggtaagcgacatcggtcgaatgctgcgtcttccgatcaatgaagacgtgcttccacga
atgggacgacttgcccaagggccgatgaccatgcggttgcttcctggggaacatctcatc
ggtgccctatgtccaacgaaaccaactgcgctgttggtgagtgaacaaggtcgtttagcg
cgcatcgatctcacctctatccgttcatcacaacgtggagatctcggttcgatggccatc
cagctagttggcgataccgatcgaatcaccggattaaccgaagccagtggcctgatcggc
atggtgtcaacagaacaacgtcatggtcggattgatcccaccactcttgaaatcaccaat
ccaggggaagaattttccaatcaaatcgaactccaccaaggtgaaaccattaccgatttg
atacctcaaatcagcggttaa
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