Synechococcus sp. CC9902: Syncc9902_0117
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Entry
Syncc9902_0117 CDS
T00293
Name
(GenBank) cyclic nucleotide-binding domain (cNMP-BD) protein
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
sye
Synechococcus sp. CC9902
Pathway
sye02010
ABC transporters
sye03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sye00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Syncc9902_0117
03070 Bacterial secretion system
Syncc9902_0117
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sye02000
]
Syncc9902_0117
02044 Secretion system [BR:
sye02044
]
Syncc9902_0117
Transporters [BR:
sye02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Syncc9902_0117
Secretion system [BR:
sye02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Syncc9902_0117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
cNMP_binding
AAA_21
AAA_22
AAA_29
AAA_30
DUF87
ABC_ATPase
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
ABB25092
UniProt:
Q3B0N6
LinkDB
All DBs
Position
121714..124734
Genome browser
AA seq
1006 aa
AA seq
DB search
MSSTSETLSALLSRFSAFQDIDDADLQWLATHSKPFHCSVGQALLFSDRLPEYCYCILEG
RGRVLHHDPALRRPVTLAYAQPGDLIGWAGLVRRSPCEWITAAMPLKLVGFPADIFYQLE
LRSEPFRNWLDTNNSPAELMTVLSHSLRSRPLAEPNEREVLRRLLPSMKLHPARSLRSIA
DFSAEDTLLLWNSKPPGFTVPVGQPIDSEILDSIPSGFPLRLISVDKSCWSRELYPPLKA
PPDSDISPASDLWGNDRYSELLVPDPQGSKESLPEINATPLSNKSSKFFWRGRQIPVVTG
VGPIEQTMACLEMLSLFHNVPFRRDVIERACKGSLKGDKPSLELTGDLSTVMGFVGTISD
IPTAQLPRLSFPCFALLDKQLIMIHDISRDIVQAVIPEYGRVVFPLIELLENNPGVRVLS
LSPGRDSQQKKLTFKWFVPQLKKYRRSLLEVLAASLVLQLLNLAQPLVMQQIFDKVIVQQ
NLDTLYTLGFVLLGVSLFQGLIGAVRTYLFADTTNRIDIALGAQVIQHLLRLPLRYFDKR
PVGELQTRIAELGNIRGFLTGSLLTLALDSVFSVIYIAVMIVYSGVLTAVTLGVVPLFLG
LTIVASPIIRGQLRKAAEKNAVTQSYLIESLNGVQTIKAQNAENNVRWQWQRRYSGYMSE
SFRTLMIGVSTGTIGSFLNQLTGLLTLWVGAYLVIKGQLTIGQLIAFRIISGYVVGPLLN
LATSWQSFQGVALSMERLSDVIDTESEGGEVDLDLLPLPPVAGEVVFQDVDFRFNDLAPL
VINRVSFSVTAGSFVGIVGRSGSGKSTIMKLLPRLYETVSGRILIDGYDISKLQLGSIRR
QIGIVPQESLLFEGSIRDNIALTTPEATPEEIVAAAKIACAHDFIMEQPDGYASRVGERG
AGLSGGQRQRIAIARAVLQAPSLLILDEATSALDYLTERQVCVNLKRHFEGSTVFFITHR
LSTIRSSDVIIMLESGRLVERGTHDELIKMEGRYFALYSQQESDLD
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtacctcagaaacactctccgctcttctttcgcgcttttctgccttccaagat
attgatgatgcagacttacagtggttagcaactcattctaagccctttcattgcagtgtt
ggtcaagctcttttattcagtgatcgcttgccagaatattgttattgcatccttgagggg
cgtggacgtgttctacatcatgatcctgctttacgtcgtcccgttactcttgcctatgca
caacctggcgatcttatcgggtgggcaggtttagttcgacgcagcccttgtgaatggata
acagccgctatgccacttaagcttgtcggttttcctgctgatattttttatcaactagag
ctgcgtagtgaacctttcagaaattggttagatactaataattctcctgcagagttgatg
actgtcctgtctcattctctccgttcgagacctttggcagaacctaacgaacgagaggtt
ttacgtagacttcttccttctatgaagttgcatcctgcaagatctttgcgctccatagca
gatttttctgctgaagataccttattactgtggaactcaaagccacccggtttcaccgtt
cctgtcggacaacctatagattccgaaatattagattctatcccttctggttttcctctt
cgtttaatatcagttgataaatcttgttggtcacgtgaactctaccctcctttaaaagct
cctcctgattccgatatatcccccgctagtgacttgtggggtaatgatcgttattctgag
ctgctggttccagaccctcaaggtagcaaagaatcacttcctgaaataaacgctactcca
ttatcaaataaaagttcaaaattcttctggcgcggacgccaaataccagttgttactggt
gttggtcctattgagcagaccatggcatgtctcgagatgttgtctttatttcacaatgtt
cccttccgtcgggatgtcattgagcgtgcttgtaagggttccttgaaaggtgataagcca
tcactggagcttactggtgatctctctaccgtaatgggttttgtcgggacgattagtgat
attcccactgctcaacttcctcgtctttcttttccatgttttgcattgcttgataagcaa
ttaattatgattcatgatatctctcgtgatatcgtccaagctgtaattcctgagtatggc
cgtgttgtttttccattaattgagttattggaaaataatcctggagttagagtattgtct
ttgtctccaggtcgcgattcacagcaaaaaaagcttactttcaaatggtttgtccctcaa
cttaagaagtaccgtcgcagtttgcttgaggtattagcagcttctcttgttttacaactc
ctcaatcttgctcagcctcttgttatgcaacagattttcgacaaagtaattgttcagcag
aatcttgatactctttatactttaggctttgttttacttggcgtaagtcttttccaaggc
ctcattggtgctgtgcgtacttatctttttgctgacactactaatcgcatagatatagca
cttggtgctcaagttatacagcatttacttcgtttgccattgcgatatttcgataagcgt
cctgttggtgagttgcagacccgtattgcagaattaggtaatattcgcggtttcctaact
ggtagtttgctaacacttgccttggattcagttttttctgttatctatattgccgtaatg
atcgtgtactccggagttttaactgctgtaactctaggtgttgttcctttatttcttggc
ctcaccattgttgcttcgcccattattcgtggtcaacttagaaaagcagcagaaaaaaat
gctgttactcaaagttatctcatcgagtccttgaatggtgttcagaccattaaagctcag
aatgcagagaataacgttagatggcagtggcaacgacggtattccggttatatgagtgaa
tcctttcgaactttaatgatcggtgtctccactggcacaatcggaagttttcttaatcag
ttgactggtcttcttacattgtgggttggtgcctatcttgtcattaagggtcaattaact
attggtcagttaattgctttccgcattatttccggatacgttgttggacctcttctcaat
ctcgctacaagttggcaaagtttccagggagtcgcactttccatggagcgcttgagcgat
gttattgatactgaatctgagggtggcgaagttgacttggatttacttccactacctcct
gttgctggtgaagtggtttttcaagacgtggactttaggtttaatgatctcgcaccatta
gttattaatcgggtatctttctccgtaactgctggctcttttgtcggaatcgttggtcga
agtggtagtggtaaaagtacgatcatgaaattattaccccgcttatatgaaactgttagt
ggtagaattttaatagatggttatgatatctcgaaacttcagcttggttctattcgtcga
cagattggaattgttcctcaggaaagtctattatttgagggatctattcgtgacaacata
gcactcactacgcctgaggcgactcctgaagagattgttgcagctgccaaaattgcatgt
gcacatgacttcattatggaacagcctgatgggtatgcttctcgtgtaggtgaacgaggc
gctggcttatctggaggtcaaagacaacgcattgctatcgcccgtgcagtcttacaagct
ccctctttactaatacttgatgaagccacaagtgctcttgattatttaaccgaacgtcag
gtttgcgttaaccttaaaaggcattttgaaggttctactgttttctttatcactcatcgt
ctttctaccattcgctcatcagatgttattattatgctcgaatcgggtcgtttagttgag
cgtggtactcatgatgagttaattaagatggaaggtcgttatttcgcgctttattcacaa
caggagtctgatcttgactga
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