Synechococcus sp. CC9902: Syncc9902_0217
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Entry
Syncc9902_0217 CDS
T00293
Name
(GenBank) Type I secretion system ATPase, HlyB
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
sye
Synechococcus sp. CC9902
Pathway
sye02010
ABC transporters
sye03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sye00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Syncc9902_0217
03070 Bacterial secretion system
Syncc9902_0217
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sye02000
]
Syncc9902_0217
02044 Secretion system [BR:
sye02044
]
Syncc9902_0217
Transporters [BR:
sye02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Syncc9902_0217
Secretion system [BR:
sye02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Syncc9902_0217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
cNMP_binding
AAA_16
AAA_22
DUF87
AAA_29
AAA_21
AAA_30
ABC_ATPase
nSTAND1
RsgA_GTPase
ABC_membrane_3
AAA_23
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
ABB25192
UniProt:
Q3B0D6
LinkDB
All DBs
Position
230954..233869
Genome browser
AA seq
971 aa
AA seq
DB search
MTQASSFPLLTHPAFNGLSEIGSNDLQQATRLLKFELGQQMCDAEVIPARVLVLLSGQAR
LVGRQMGRLTTVGKFGPGSVIGAASLLTGSACENVIASDDVVACAIPDQVWSELYASEAS
FRAWCDQQVWPQELLQLLERLDRGSADADESPLEQLEQALQGALHCAPTPESVGAAIAVG
QLVYVTSCWGEARVGQQLDAASVLPESDRFALRLVALAAPEAADREDSPAPLVHADAVES
AELLPPVSRFSPERNVVDSLHLIRADGPLAETLACFQMLSQLMKLPFRRDSIEKVLQDNI
RRGLTPNLQLCGQLAASLGLHVMAAKVPSLAGTRLQVPSLLPWQGGFALVVASNEMGLRL
ASPKHGLVVLGPQELQASFPEGIDLLLMERSNATPDQKFGPGWFWPALKRYRSVLIQVLA
ASFVVQLFTLANPLLIQVIIDKVITQRSLDTLQVLGIALVVVTILEGILGSLKTFLFAET
TNRIDQRLGAEVIDHLLRLPLGYFDRRPVGELGTRVAELEKIRNFLTGQALTTILDAAFS
VIYIMVMLVYSWLLTLIALSVLPIQIGLTLLGAPLFRRQYRAAAEENAKTQSHLVEVLTG
IQTVKAQNVEMVSRWRWQEFYSNYIARTFEKTITGTALNQTSQVLQKISQLMVLWIGASM
VLSGDLTLGQLIAFRIISGYVTQPLLRLSTIWQSIQELRISFERLADVIDTPQESDEVDK
TKVMLPPLQGQIRFEDLSFRFRPGQPEVLKDINLEVKSGTFVGIVGQSGSGKSTLMKLLP
RLYEPDRGRILIDGFDISKVELYSLRRQIGIVPQDPLLFSGTVSENIALTNPDVSSEEIV
RAARLANAHDFIMELASGYSTPVGERGANLSGGQRQRVAIARTLLSNPKLLVMDEATSAL
DYETERKVCDNLHGNLKEQTVFFITHRLSTIRQADMIVMMHQGAVVEVGSHDDLMKHRGR
YYALYRQQESL
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggcttcatccttcccgttgctgacccatccagcctttaacggtctgagtgaa
atcgggtccaacgaccttcaacaggccacgcggctgttgaagtttgaacttggccagcag
atgtgcgatgccgaggtgatccctgcacgggtgcttgtgctgctgagtggccaagcccga
ttggtggggagacaaatgggtcggctgaccaccgtgggcaaatttggcccgggcagcgtt
attggagcagccagtctcctaacaggatcggcctgcgagaacgtcattgcttccgatgac
gtggtcgcttgcgcgattccggatcaggtttggtccgagttgtatgcgtcggaagcgtca
tttcgcgcctggtgtgaccaacaagtgtggcctcaggaattgctgcaacttctggaacgg
ttggatcgcggatcggctgatgccgacgaatctccgttggagcaacttgagcaggcattg
cagggggctttgcactgtgcccccaccccggaatcggtgggtgcggcgatcgccgttggc
cagttggtgtatgtgaccagctgttggggtgaggcgcgggttggccaacaactcgatgcg
gcgagtgttttgcctgagagcgaccgatttgcgttgcgcttggtggccttggctgctccg
gaggccgctgatagagaggattctccagcaccccttgtgcacgctgatgcggtggagtcc
gcggagcttctgccccctgtcagccgtttcagcccagagcgcaatgtggtggacagcctt
catctcattcgcgccgacggtccgttggcggaaacgctcgcttgttttcaaatgctctcg
cagctgatgaagttgccgtttcgtcgggattcgatcgaaaaggtccttcaagacaacatt
cgtcgcggcttgacgccgaatttgcagctctgtggccagttagcggcaagtctgggtctt
catgtgatggcggccaaggtgccttcgctggccggcacacgcttgcaagtgccgtccctg
ttgccgtggcaaggcggcttcgccctggtggtggccagcaatgagatggggttacgcctg
gcatctccgaagcatggtttggtggtgcttggcccgcaggagcttcaagcgagtttcccg
gagggtattgatctgcttctgatggagcggtcgaatgccacgcccgaccagaagtttggg
cccggttggttttggcctgcattgaagcgttatcgcagcgtcttgattcaggttttggcg
gccagttttgtggttcagctcttcaccctggccaaccctctattaattcaggtgatcatc
gataaggtgatcactcagcgcagtcttgacacccttcaagttctgggaattgctttggtg
gttgtcaccattctggagggaattttaggcagtctgaaaacatttttgttcgcagaaact
accaatcgcattgatcagcgccttggcgcggaggtgattgatcaccttcttcgcttgccg
ttggggtatttcgaccgtcgtcccgtcggagaactggggacgcgtgttgcagagctggaa
aagattcggaatttcttgactggacaagctctgacaacgattctcgatgccgctttttca
gtgatctacatcatggtgatgttggtgtacagctggctgctcaccttgatcgccctttcg
gtgttgccgattcagatcggcctcacgcttcttggggcgccattatttcgccggcaatac
cgggccgcggcagaggagaatgccaagacccagagccatctagtggaagtgctcactggg
atccaaacggtgaaagcacagaacgtcgaaatggtgagtcgttggcgctggcaggagttt
tattccaattacatcgctcgcacatttgagaaaacgattactggcacggctctcaatcag
accagccaggtacttcaaaagatctctcagctaatggtgctgtggatcggtgcctccatg
gttctgagtggggatctaactcttggtcaattaattgctttccggattatctccggttat
gtcacccagcctttgcttcgtctttccacgatttggcagagcattcaggaattaagaatt
agcttcgaacgactcgctgatgtgattgatactccccaggaatcggatgaggttgataaa
acaaaggtcatgctccctccgcttcaggggcagattcgatttgaagatctcagcttccga
tttcggcctgggcagcctgaagtactgaaggacatcaatctggaagtgaagtctggaact
tttgttgggattgttggacagagtgggagtggaaagagcacgctaatgaaacttctgcca
aggctttatgagcctgatagaggacgaatattgattgatggtttcgacatttctaaggtg
gaattgtattcactccgtcgtcaaatcggaattgttccccaggatcctttgctatttagc
ggcacggtgagtgagaacattgcgctcaccaatccggatgtgtcgagtgaggaaattgtg
cgagcggcgcgccttgcgaatgctcatgacttcattatggaattagccagtggttacagc
acgcctgttggagagcgtggagccaacctctcgggaggccagcgccagcgtgtggccatt
gccagaacgttgttaagcaacccaaaattgttggtgatggatgaggcgacgagtgctctg
gactatgaaacagagcggaaagtttgtgacaacttgcatggcaatctgaaagagcaaaca
gtctttttcatcacccatcgtctttctacgattcgtcaggccgatatgatcgtgatgatg
caccaaggtgccgtggttgaggtgggttcccacgatgatttgatgaagcatcgtgggcgt
tattacgctctttatcgccaacaggagagtttgtaa
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