Synechococcus sp. CC9902: Syncc9902_0532
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Entry
Syncc9902_0532 CDS
T00293
Name
(GenBank) RNAse Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sye
Synechococcus sp. CC9902
Brite
KEGG Orthology (KO) [BR:
sye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sye03016
]
Syncc9902_0532
Enzymes [BR:
sye01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Syncc9902_0532
Transfer RNA biogenesis [BR:
sye03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Syncc9902_0532
Prokaryotic type
Syncc9902_0532
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
DUF6296
Motif
Other DBs
NCBI-ProteinID:
ABB25500
CyanoBase:
Syncc9902_0532
UniProt:
Q3AZH7
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Position
complement(541946..542905)
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AA seq
319 aa
AA seq
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MQVTFLGTSSGVPTRARNVSAVALRLPQRSEMWLFDCGEGTQHQFLRSELRLSQLRRVFV
THMHGDHVFGLPGLLASLGLAGNSNEGVDLYGPDPLESYLNGVLRTSSTRIGYPLKVHRV
HDCAENGTLVYEDDDLMVRCTPLTHRVPAYAYRVDQKPLAGRFDIAKAKDLQIPPGPIYA
QLKRGDTVTLEDGRVIDGTTLCGPERPGVSVVYCTDTVFCEAAVDLAQGADLLIHESTFA
HQESEMAYQKQHSTSTMAAQTAAEANVGQLVLTHLSPRYAPGNAVTPEDLLKEAQAIFPN
TCLAKDFLTLEVKPRCNSL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
ttgcaggtcacctttctgggaacaagttctggcgttcccactcgggcacgcaacgtttcg
gctgtagcgctgcgactgccacagcgctcggagatgtggctattcgactgtggcgaggga
acccagcatcagtttctgcggagcgaacttcggctctcgcagctcagacgggtcttcgtg
acccatatgcacggcgatcacgtgttcggccttccaggccttctggccagccttggctta
gctggcaacagcaacgaaggcgtcgacctctacggccctgatcctctcgagagctatctc
aacggcgtactgcgcaccagctccacccggatcggctaccccctcaaagtgcaccgcgtt
cacgactgcgcggagaacggaaccctggtgtatgaagacgacgatctgatggtgcgctgc
acaccgctcacccatcgcgttccggcctacgcctatcgggtggaccaaaaacccttagcg
ggacgattcgatatcgccaaggccaaagacctacaaatccctcccggtcccatctacgcc
cagctcaagcggggagacaccgtcaccctcgaagacgggcgcgtcatcgacggcacaacc
ctctgcggtccagagaggcctggagtgagcgttgtgtattgcaccgacacggtgttctgc
gaagcagcggtcgaccttgcccaaggcgccgatttactgattcacgaatcgacctttgct
caccaagaatcagagatggcttatcaaaaacagcattccacgagcacgatggcggcccaa
acggcggcggaagccaacgttgggcaactcgtcctcacccacctgagcccccgctacgcc
cccggcaatgccgtaacgccagaagaccttttaaaggaagcccaagcgatcttcccaaac
acctgtctggcaaaggatttcctcactttggaggtaaaaccgcgctgcaacagtttgtga
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