Synechococcus sp. CC9902: Syncc9902_0594
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Entry
Syncc9902_0594 CDS
T00293
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
sye
Synechococcus sp. CC9902
Brite
KEGG Orthology (KO) [BR:
sye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sye03021
]
Syncc9902_0594
03009 Ribosome biogenesis [BR:
sye03009
]
Syncc9902_0594
Transcription machinery [BR:
sye03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Syncc9902_0594
Ribosome biogenesis [BR:
sye03009
]
Prokaryotic type
rRNA transcription factors
Syncc9902_0594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
KH_1
KH_NusA_C
Helicase_C_3
Motif
Other DBs
NCBI-ProteinID:
ABB25562
UniProt:
Q3AZB5
LinkDB
All DBs
Position
complement(600948..602405)
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AA seq
485 aa
AA seq
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MALVLLPGLTNLIDDISEEKKLAPQVVEAALREALLKGYERYRRTLYIGISEDPFDEDYF
SNFDVGLDLEEEGYRVLASKIIVDEVESEDHQIALAEVMQVAEDAQSGDTVVLDVTPEKE
DFGRMAAATTKQVLAQKLRDQQRRMIQEEFADLEDPVLTARVIRFERQSIIMAVSSGLGR
PEVEAELPRRDQLPNDNYRANATFKVFLKEVSEVPRRGPQLFVSRSNAGLVVYLFENEVP
EIQEGSVRIVAVAREANPPSRSVGPRTKVAVDSIEREVDPVGACIGARGSRIQQVVNELR
GEKIDVIRWSQDPGQYIANSLSPARVEMVRLVDPAGQHAHVLVPPDQLSLAIGREGQNVR
LAARLTGWKIDIKNSTEYDQPAEDAVVAELISQREEEEALQQEAEERLAVEQAARAEEDA
RLRELYPLPEDDEDYVEEAELSEEPSAEFVEGDAVIEDVEGETVAPEETGEASGDAETNM
SEDAR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctctcgtactgcttcccggtctcaccaatctgatcgatgacatcagtgaagagaag
aaactcgctccgcaagttgttgaagcagctttacgggaagccctgctgaagggatacgag
cgataccggcgcactctctacatcggcattagcgaagatccttttgatgaggattacttc
agcaattttgacgttggtcttgatctcgaagaggagggatatcgagttcttgccagcaaa
atcattgttgacgaagttgaaagcgaagatcatcaaattgcccttgcggaggtgatgcaa
gtagccgaagacgcccaatctggcgacacggtcgtgctcgacgtcacgccagagaaggaa
gatttcggtcgtatggctgcggccacaaccaaacaagtcctggcccaaaagctgcgggat
cagcagcgtcgaatgatccaagaggaatttgccgatctcgaagatcccgtgctcaccgct
cgggtgatccgcttcgaacgtcagtcgatcatcatggctgtgagttcaggcctaggcagg
cccgaagtggaagcggagctccctcgccgcgaccagctgccgaatgacaactaccgggcc
aacgccaccttcaaggtgtttttgaaagaggtgagcgaagtaccgcggcgcggtccacag
ctcttcgtgagccgctccaatgctggcctcgttgtttatctattcgaaaacgaagttcca
gaaatccaagaaggttccgtccgcatcgtggccgttgcccgtgaagcgaacccaccatca
cgatccgttggtccacgcaccaaagtcgctgtcgacagcattgaacgggaagtcgaccct
gtcggcgcttgcatcggtgctcgcggatccaggatccaacaggtggtcaacgagctgcgc
ggtgaaaaaattgatgtcattcgctggtcgcaagatccaggccaatacatcgctaactcc
ctcagtcccgctcgggttgaaatggtgcggctcgttgatcccgctggacaacatgcccac
gttttagtaccacccgatcaactcagccttgccattggccgtgaaggtcaaaacgtgcgt
ttggcggctcgactaacgggctggaaaatcgacataaaaaattcaactgaatacgaccag
cccgctgaagatgcagttgttgctgaactgatttctcagagagaagaagaggaagcgctt
cagcaagaagcggaggagcgcttagcggtggaacaagccgcaagggcagaagaagatgct
cgcctccgggagctctatccactcccagaagatgacgaggactatgtcgaggaagctgaa
ctctccgaagaaccctctgccgaatttgtcgagggagatgccgttattgaagacgtagag
ggggagacagtcgcccctgaagagacaggcgaggccagtggcgatgccgaaaccaacatg
agtgaggacgcccggtga
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