Synechococcus sp. CC9902: Syncc9902_1678
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Entry
Syncc9902_1678 CDS
T00293
Name
(GenBank) Sigma-70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
sye
Synechococcus sp. CC9902
Brite
KEGG Orthology (KO) [BR:
sye00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Syncc9902_1678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sye03021
]
Syncc9902_1678
Transcription machinery [BR:
sye03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Syncc9902_1678
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Ndc1_Nup
Motif
Other DBs
NCBI-ProteinID:
ABB26636
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Position
1624646..1626001
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AA seq
451 aa
AA seq
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MTPAATKSAKPDIVLLANAEGQVKNVVPTAKGATKKAPARKRKASSSAEDLNAAADELLA
KADGSTKTSEGKTKKAATKATSVKSAAKKTTAKKAATPKAKTAAPELTAEEKAKAASAEK
EAKAKALASIKIGPKGVYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLYLEELAAQ
FESDNGREPDKKEWAALVEMPLIRFRRRLMLGRRAKEKMVQSNLRLVVSIAKKYMNRGLS
FQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETI
SRIKKTTKVLSQEFGRKPTEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLG
DFIEADIENPEQDVAKNLLREDLEGVLATLSPRERDVLRLRYGLDDGRMKTLEEIGQIFD
VTRERIRQIEAKALRKLRHPNRNGVLKEYIK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgactcctgctgccaccaaatccgcgaaaccggacatcgttctattggcgaacgccgaa
ggacaggtgaagaatgtggtgccgactgccaagggcgcaacaaaaaaagctccggcacgg
aaacggaaggcaagctcaagcgctgaggatttgaatgcggcagcagacgaacttcttgcc
aaggcagacggcagcaccaagacatcagaagggaaaacaaaaaaagcagcaacaaaggcg
acgtcagtgaaaagcgcggccaagaaaacaacagccaagaaagcagctacaccaaaagcc
aaaactgcggcaccagaactcacagctgaggaaaaagccaaagcggccagtgcagaaaaa
gaagccaaagcaaaggctttggccagcatcaaaatcgggccgaagggggtctacaccgaa
gattcgattcgtgtgtacctgcaggaaatcggacgcattcgcctcttgcgacctgacgaa
gagatcgaactggcccgcaaaattgccgaccttctttatctagaagagctggccgcacaa
tttgaaagcgataacggtcgtgagcccgacaaaaaggagtgggcagcactcgttgagatg
ccgctcattcgcttccgccggcggttgatgctgggccgacgagccaaggaaaaaatggtg
cagtccaacctgcgccttgtggtgtcgattgccaagaaatacatgaatcgaggcctgagt
ttccaggacctgattcaagagggcagccttggcctgatccgcgccgctgaaaaattcgat
cacgaaaagggctacaagttctccacctacgccacctggtggattcgtcaggcgatcaca
cgggcgatcgccgaccaaagccggacgattcgcctacctgttcacctttacgaaacgatc
tcgaggatcaagaagaccaccaaggttctgtcccaagaattcggtcggaagccaacagaa
gaggaaattgcggaatcgatggaaatgaccatcgagaagctgcggttcatcgccaagagc
gctcaattgccgatctcccttgaaaccccgatcgggaaagaagaagattcccgcttgggc
gacttcatcgaagccgacatcgaaaaccccgaacaggacgttgccaaaaatcttctgcgt
gaggatcttgaaggcgtgctggctaccctcagcccccgcgagcgcgatgtactgcgcttg
cgctacggcctggatgacggtcgcatgaaaaccctcgaagagattggccagatttttgac
gtaacccgagagcggattcgtcaaattgaagcgaaggcccttcgcaaattgcggcatccc
aaccgcaatggtgttctcaaggaatacatcaaataa
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