Synechococcus sp. CC9902: Syncc9902_1884
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Entry
Syncc9902_1884 CDS
T00293
Name
(GenBank) phycobilisome linker polypeptide
KO
K05379
phycoerythrin-associated linker protein
Organism
sye
Synechococcus sp. CC9902
Pathway
sye00196
Photosynthesis - antenna proteins
sye01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sye00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
Syncc9902_1884
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
sye00194
]
Syncc9902_1884
Photosynthesis proteins [BR:
sye00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Phycoerythrin (PE)
Syncc9902_1884
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PBS_linker_poly
CpcD
Motif
Other DBs
NCBI-ProteinID:
ABB26841
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Position
1808127..1809767
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AA seq
546 aa
AA seq
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MDTTQASKGFGAETKWSSPVSFERKGVSKKPALTIGEFLKQSCDQLAIGVGPRSHADCPH
RVTAECYSPDDSASLSDVISAAYRQVFGNAHVMDFERCAELEAQLRNGDIDVRNFIRGLA
KSSFYKSRFFLSVAPQRGIELNFKHLLGRAPHSQAEMSAKISLQAEHGQAAVIDSIVDSA
EYLEVFGSNVVPYARSWSSPADLSTAAFPMLAALEKSFAGSDSARGGSSSLTTSLGRGMA
PRISVPSQPFGVRPSAGGGARFASKAPGVTSGKDNAPMRGDSYVFFGLGQREQETYQRCP
GDSPDQLAALIRASYKQVMGNPHLMEFERAISAESKFIDGYLSTREFVRAIGLSAEYKRR
FFETNAPYRFIELNFKHFLGRAPKSQAEISLHTKILAEGGYDAEIASYVDCEEYQSTFGE
DTVPFARILSENGRSQVAFNRHLKLAEGFAASDTVQTSSSLVTSVATGTVPGGWSSTTTR
INRTGTQSGAPDPTKKRFRIVVGAQAARGRQRTAGNTYLVSGKDMSSQMKYIHARGGKIV
SITEVM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggacacaactcaagcttcaaaaggattcggcgcagaaaccaaatggagcagccccgtc
agctttgagcgcaaaggagtcagcaaaaaacctgctctcacaattggtgagttcctcaag
cagtcatgcgatcaactggcgatcggggttggacctcgcagtcatgccgattgccctcac
cgcgtcaccgcagagtgctacagcccagacgactcggcatcgctgagtgacgtcatctct
gccgcataccgacaagtctttggtaatgcccatgtgatggatttcgaacgttgcgccgag
cttgaagctcaactgcgcaatggagacatcgacgttcgcaattttattcgcggacttgcc
aaatcaagcttttacaaaagccgctttttcttatccgttgcccctcaacgcggcattgag
ctgaacttcaaacacctgctagggcgcgcaccgcactcccaagcagaaatgtcagcaaag
atctccctgcaagcagagcacgggcaagcagctgtgatcgacagcatcgtcgattcggcc
gaatacctcgaagtctttgggagcaacgtggttccctatgcacgttcatggagctccccc
gcagatctctcaacagcggcattccccatgctggccgctctggagaaaagctttgcggga
agcgacagtgcgcgcggcggtagcagctcactcacgacaagcctgggccgtggcatggct
ccccggatcagcgtcccgtcacaaccatttggcgtccgcccatctgcagggggcggtgct
cgcttcgcaagcaaagcacctggcgtgaccagcgggaaagacaatgcaccgatgaggggc
gattcctacgtgttcttcggcctaggccagcgcgaacaagaaacctaccaacgctgcccc
ggcgacagccccgatcaactcgcagcattgattcgcgcgtcttacaaacaagtgatgggc
aacccccatctgatggaatttgagcgtgccatctcagcggaaagcaaattcatcgacggc
tacttgagcacccgtgaatttgtccgtgccattggactgtcggctgaatacaagcgccgt
ttcttcgaaacgaacgctccatatcgcttcatcgagttgaacttcaagcacttcctcggt
cgggctccgaagtcccaagctgaaatcagtctgcacaccaaaatcctggccgaaggtggc
tacgacgcagaaatcgcaagctacgtcgattgcgaggaataccagagcaccttcggggaa
gacaccgttccattcgcccggatcctgtctgaaaacggacgctctcaagtggccttcaac
cgtcacctgaaactggctgaaggcttcgctgctagcgacaccgttcaaaccagttcttcc
ctcgtaacgtccgtggcaactggaacggttcctggaggctggagttccacaaccacacgg
attaaccggactggtacacagtctggtgcgcccgatcccaccaagaagcgtttccggatt
gtggttggtgctcaagcagcccgtggacgccaacgcactgcagggaacacgtatttggta
tccggcaaagacatgtcgagccagatgaaatacatccatgcccgtggcggcaagattgtt
tccatcactgaagtgatgtaa
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