Synechococcus sp. CC9902: Syncc9902_1922
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Entry
Syncc9902_1922 CDS
T00293
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sye
Synechococcus sp. CC9902
Brite
KEGG Orthology (KO) [BR:
sye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sye03016
]
Syncc9902_1922
Enzymes [BR:
sye01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Syncc9902_1922
Transfer RNA biogenesis [BR:
sye03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Syncc9902_1922
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ABB26879
UniProt:
Q3AUV4
LinkDB
All DBs
Position
complement(1836708..1837352)
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AA seq
214 aa
AA seq
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MAGSPSIPAEFAVFDGDLDASWTERYLQMPCLAVDTEAMGLIHGRDRLCLVQIADAQDRV
ACVRIALGQSTAPNLQRLFEAPSVEKVFHFARFDVAALAAGLDIAVQPLFCTKVGSRLGR
TYTPRHGLKDLVMELVGVELDKGAQSSDWGRVDELTDVQLAYAANDVRYLLPARNKLETM
LRREGRWELAQRCFACIPVMAELDRMRFNQTFEH
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggccggttctccttccattcctgccgagttcgctgtgttcgatggggacttggatgcg
tcttggacggagcgttatctccaaatgccttgtcttgcggtcgataccgaagccatgggc
ctgatccatggccgcgaccgcctctgtttggttcagatcgctgatgcacaggatcgtgtc
gcgtgtgtgcgcatcgctttgggtcaatccactgctcccaaccttcagcgtttgtttgag
gcgccatcggtggagaaggtgtttcacttcgctcggttcgatgtggcagccctcgcggct
gggcttgatattgctgttcagcctttgttttgcaccaaggttggtagccgcttggggcgg
acatacacgccccgacatggcctcaaggatctcgtaatggaactggtgggagtcgagctc
gacaagggagcgcagagtagtgactggggacgggtggatgagctcactgatgttcagctc
gcctatgccgctaatgatgtgcgttacctcctcccagcgaggaacaagctggaaacgatg
ctgcgtcgggaggggcgttgggagttggcgcaacgttgttttgcctgtattcccgtgatg
gctgaattggaccggatgcggtttaaccaaaccttcgagcattga
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