Synechococcus sp. CC9902: Syncc9902_2293
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Entry
Syncc9902_2293 CDS
T00293
Name
(GenBank) type II alternative RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
sye
Synechococcus sp. CC9902
Brite
KEGG Orthology (KO) [BR:
sye00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Syncc9902_2293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sye03021
]
Syncc9902_2293
Transcription machinery [BR:
sye03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Syncc9902_2293
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
DUF1118
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
ABB27251
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All DBs
Position
2201132..2202118
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AA seq
328 aa
AA seq
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MGIPLETSKSTTQSTRKQPALPSTGRRSASRQSGRLATDSIGFYLSSIGRVPLLTAAEEI
ELAHHVQDMKQLKELPQEELTSRQKHKIRMGKRARDRMMAANLRLVVSVAKKYQNQGLEL
LDLVQEGAIGLERAVDKFDPAMGYKFSTYAYWWIRQGMTRAIDNSARTIRLPIHISEKLS
KMRRISRELSHRFGRQPNRLELASAMGIEPRELEDLITQSAPCASLDAHARGEEDRSTLG
ELIPDPNGEEPMEGMDRSIQKEHLGGWLSQLNEREQKILRLRFGLGGEEPLTLAEIGRQI
NVSRERVRQLEAKAILKLRTMTNHQQAA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggggatccctctggagacttccaagtcgacaactcagtcgacccggaagcaacctgct
ttgccgtccaccggacgtcgctcagcttcacgtcaaagtggacgcttggcaacagactcc
attggcttttatctgagcagtattggacgcgttccactgctcaccgcagccgaagaaatt
gagctcgcccatcatgtccaagacatgaaacagctcaaagagttgccccaagaggaactc
acctcgcgacaaaagcacaagatccggatgggaaaacgtgcccgcgatcgaatgatggca
gccaacctgcgactggttgtgagcgtggccaagaagtatcaaaaccaaggtttggaattg
ctcgacctcgttcaagagggagcgattggcctcgagcgtgctgtcgataaatttgatccg
gccatgggatacaagttttcaacttatgcctactggtggatacgccaaggcatgacgcgc
gccattgataacagcgcaagaacgattcgactaccgattcatatcagcgagaaattatca
aaaatgcgccggatctctcgggagctgtcgcatcgctttggccgtcaacccaaccggctt
gagctggccagtgccatgggtattgaacctcgtgaactggaagatctgatcacccaaagt
gcaccatgcgcatccctcgatgcccatgcccgaggtgaagaagaccgcagcactcttggt
gaactcattcctgatcccaacggggaagagccgatggaaggcatggatcgcagcatccag
aaggaacatcttggtggctggctctctcaactcaatgagcgcgaacaaaaaattcttcga
ctgcgttttggtctcggaggagaagagccgttaacccttgcggaaatcggtcgacagatc
aacgtgtcccgcgaacgcgtgcgtcagttggaagcgaaagcaattttgaaactccgcaca
atgacgaaccatcagcaagccgcctga
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