Synechococcus elongatus PCC7942: Synpcc7942_0678
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Entry
Synpcc7942_0678 CDS
T00300
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
syf
Synechococcus elongatus PCC7942
Brite
KEGG Orthology (KO) [BR:
syf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syf03016
]
Synpcc7942_0678
Enzymes [BR:
syf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Synpcc7942_0678
Transfer RNA biogenesis [BR:
syf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Synpcc7942_0678
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABB56710
UniProt:
Q31QF9
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All DBs
Position
672767..673402
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AA seq
211 aa
AA seq
DB search
MSSIDSDFHLCEQDLTDELLAQYRQSPAIAIDTEAMGLNFHRDRLCLVQLCDSAGITTCV
RIAQGQTVAPNLQALCEDPQITKVFHFARFDITALKHGLGIAVQPIFCTKIASKLARTYS
SQHGLKSLLQELVGVELDKTAQSSDWGNAAALSHEQMRYACNDVRYLLAAQAKLTTMLQR
EGRWQLAQDCFACLPTFAALDLAQFGSVFEH
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcatcgactcagactttcatctgtgtgaacaagacttaacagatgagttgcta
gcgcaatatcggcagtcccctgcgatcgccatcgacaccgaggcaatggggctgaatttc
caccgcgatcgcctttgcctagtgcaactctgcgattcagcgggaattacaacctgcgtg
cgcatcgcccaagggcaaaccgtcgccccgaatttgcaagccctctgcgaggatccgcaa
attaccaaggtcttccacttcgcccgcttcgacatcaccgccctcaagcatggccttggg
attgcggttcagcccattttttgcaccaagatcgccagcaaactagcacgcacctatagc
tcacagcacggcttaaaaagcctgctccaggagttggtgggtgtcgagctggacaagaca
gcccaaagttctgactggggcaatgctgcagcgctctcccatgagcagatgcgctacgcc
tgcaatgacgtgcgctatctcttggctgctcaggcaaaattgacgacgatgctgcagcgt
gaaggtcgctggcagttggcccaagattgctttgcctgtcttcccaccttcgcggccctc
gatctggcccagtttggcagtgtgtttgagcactag
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