Synechococcus elongatus PCC 7942 = FACHB-805: Synpcc7942_1124
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Entry
Synpcc7942_1124 CDS
T00300
Name
(GenBank) Exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
syf
Synechococcus elongatus PCC 7942 = FACHB-805
Brite
KEGG Orthology (KO) [BR:
syf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syf03016
]
Synpcc7942_1124
Enzymes [BR:
syf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Synpcc7942_1124
Transfer RNA biogenesis [BR:
syf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Synpcc7942_1124
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
WHD_RNase_II
RNase_II_C_S1
SapC
Motif
Other DBs
NCBI-ProteinID:
ABB57154
UniProt:
Q31P65
LinkDB
All DBs
Position
1141288..1143300
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AA seq
670 aa
AA seq
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MEAGTLIEFRLGGQRHLGVLDRPDGKKNWIVVDERGANRSLHPRDFTYVVAGQIYKPQEL
AAFRREVEALLDPDALAIAWEMLVDEGEEAELAILSDLLFSQADPAALYATFRLLDDDRT
YFRQRRDRYEARSREQVAEQQRQLAIAAEKARLWQNFLDRCQQAQGGETVTWIDSDRPWL
KALEQWALFSEDGNNTRAATEVLTALGRQASAQAAHDLLVALGYWQPHENLFLRRSQVPT
TFPVAVMDVVQTCLDAPPVDRDRRQDLSHLKVYTIDDESTREIDDGLSCQRLSDGRLQLW
VHVADPTRLIEPGDALDLEARRRSTTIYLPTGMVPMFPLELAAGPMSLVQGQACCALSFG
ICLDEQGAIASYEIVPSQIRPTYRLTYEDVDEMLDLGVTAEQELLDLWEMAQRRRRWRHQ
QGAIAINMPEAVIKVSEADDQISISVLEESAARALVAEMMILAGEVAGHYGATNGLPLPF
RGQPQPELPSEEELLALPAGPVRSCAIRRCMPRSETSLNPQRHASLGLDRYSQVTSPIRR
YTDLVTHFQIKAHLRGDQLPFSAEELETLLQSTLSLSYEAVLVERQTNRYWGLEYLRRQG
DRIWSSLILRWLREHEQLALILIEDLGLELPIRLSQPVELGDRLALRVTHADPRQDRIQF
EVVESLESVD
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
gtggaagcaggaacgctgattgagtttcgcctaggtggtcaacgccacttaggcgttttg
gatcgtccagacggcaaaaaaaattggattgtcgtcgatgaacgcggggcaaaccgctcg
ctccacccccgcgatttcacctatgtggtggcgggacaaatctataaaccccaagagctt
gctgcttttcgcagggaagtggaggccctactcgaccccgatgcgttagcgatcgcttgg
gaaatgttggttgatgaaggggaagaggcagaactcgcaatcctcagtgatctgctgttc
tcacaagcggatccagccgccctctacgcgacctttcgtctcttggatgacgatcgcacc
tacttccggcagcgccgcgatcgctacgaagcgcgcagccgtgagcaagtcgctgagcag
caacgacagctggcgatcgctgctgaaaaagcccgactctggcaaaactttctcgatcgc
tgtcagcaggcacaaggtggtgagactgtcacttggatcgatagcgatcgcccttggttg
aaggccctcgaacaatgggcactctttagcgaagacggcaacaacactcgagctgcgacc
gaagttctgacagctttaggtcgccaagcctcggctcaggctgcccatgacctgttggtc
gccttgggttactggcaaccgcacgaaaatctctttttgcgccgcagccaagtcccgaca
acattccctgtcgcggtgatggatgtggttcaaacttgcttagatgctcctcccgttgac
cgcgatcgccgtcaggatctcagccatctcaaggtctacacgatcgatgatgagagtaca
cgggagattgacgatggtttgagctgtcagcggctcagcgacggtcgcctccaactctgg
gtgcatgttgctgacccaacccgcttgattgaaccgggcgatgccctagatctggaagcc
cgtcgccgcagcaccaccatctatttacccaccggcatggtaccgatgttccccttggaa
ctggcggccggtccgatgagtttggtgcaagggcaagcctgctgtgccctcagctttggt
atctgtctggatgagcaaggggcgatcgccagctacgagattgtgcccagccaaattcga
ccgacctatcgcctcacctacgaagatgtcgacgaaatgctcgacctcggcgtgacagca
gagcaagaattactcgacctctgggagatggcccaacggcgacgccggtggcggcaccag
caaggggcgatcgccatcaacatgcctgaggcggtgatcaaggtctctgaagccgacgat
caaatctcgatttccgtgctagaagaatcggctgcgcgtgccctcgtcgccgaaatgatg
attctggcaggtgaagtcgcgggccactacggcgcaacaaacggcttaccgctaccgttc
cggggacagccccaaccggaattaccgagcgaagaagaattgctggcgctgcctgccggt
cctgtccgatcctgtgcaatccggcgctgtatgcctcgcagcgaaacgagtctcaacccc
cagcgccatgccagcttgggcctcgaccgctactcgcaggtcacctccccgattcggcgc
tacaccgacctcgttacccacttccaaatcaaggcgcatctgcggggcgaccaactcccc
ttcagtgcagaagaactggaaacactgctgcagagtaccctcagcctcagctatgaagcc
gtgctggtggagcggcagaccaatcgctactggggtctggagtacctgcgtcgtcagggc
gatcgcatctggtcgtccctgattctgcgctggctgcgagagcacgagcaacttgcgttg
attctgattgaagaccttggcttagagctgccaattcgcctcagtcagcccgtggaactg
ggcgatcgcttggctctacgcgtcacccacgccgacccgcgccaagatcgcatccaattt
gaggtggtcgaaagcctagagtctgtggactag
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