Synechococcus elongatus PCC7942: Synpcc7942_1246
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Entry
Synpcc7942_1246 CDS
T00300
Name
(GenBank) carotene isomerase
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
syf
Synechococcus elongatus PCC7942
Pathway
syf00906
Carotenoid biosynthesis
syf01100
Metabolic pathways
syf01110
Biosynthesis of secondary metabolites
Module
syf_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
syf00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Synpcc7942_1246
Enzymes [BR:
syf01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
Synpcc7942_1246
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GFIT
Motif
Pfam:
Amino_oxidase
DAO
NAD_binding_8
FAD_binding_2
HI0933_like
Pyr_redox_2
FAD_oxidored
Thi4
FAD_binding_3
GIDA
Pyr_redox
GMC_oxred_N
GDI
Ribosomal_L21e
POTRA_1
Motif
Other DBs
NCBI-ProteinID:
ABB57276
UniProt:
Q31NU3
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Position
1270803..1272317
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AA seq
504 aa
AA seq
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MTAAIAAPAYDAIVIGSGIGGLVTATQLAAKGAKVLVLERYLIPGGSAGWFERQGYRFDV
GASMIFGFGDRGTTNLLTRALADVGQALETIPDPVQIHYHLPNQLDLKVHRDYEAFLQEL
IAQFPQEAEGIRRFYDECWQVFNCLNAMPLLSLEEPKYLFNVFLQHPLACLGLVKYLPQN
VGDIARRYIRNPDLLKFIDMECYCWSVVPATMTPMINAGMVFSDRHYGGINYPKGGVGRI
AEKLVAGLEAKGSSIRYKARVTRILTEKGRAIGVELADGEKLYAKRIISNATRWNTFGEL
LPPQQEPAQEQRWQQRYRQSPSFLSLHLGVKADLLPAGTECHHILLENWDELEVEQGTIF
VSIPTLLDPSLAPPDRHIIHTFTPSWLGEWDNLSPSEYRDRKAAAAAKLIQRLEAIFPGL
SSAIDYQEVGTPRTHRRFLGRQNGTYGPIPRRKLAGLLGMPFNRTAIPGLYCVGDSTFPG
QGLNAVAFSGYACGHRVAADLGLV
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgcgatcgctgcacccgcctacgacgccatcgtgattggctcgggcattggc
ggactcgtgacggcaacccagctcgcagccaaaggcgcaaaggttttggtgctcgagcgc
tatctgattccgggcggaagtgcgggctggttcgagcggcaaggctatcgcttcgatgtc
ggcgcatcgatgatctttggctttggcgatcgcggcacgactaatttgctgactcgcgcc
ttggccgatgttgggcaagcgctggaaactatccccgatccggtgcagattcattaccac
ttgccgaaccagctcgatctcaaggtgcatcgggactacgaagctttcctacaagaactg
atcgcccagttcccccaggaagcggagggaattcgtcgtttttacgacgagtgttggcag
gtgttcaactgccttaatgcgatgccactactgtcgctcgaggaaccgaagtatctgttc
aatgtcttcctgcaacatcctttggcctgcttgggcctggtcaaatatctgccccagaat
gttggtgatattgcacggcgctacattcgcaatcccgatctgctgaagttcatcgacatg
gagtgctactgctggtcggtggtgcctgccacgatgacaccgatgatcaatgctggtatg
gtctttagcgatcgccactacggcggaattaactatcccaagggcggtgttggccgcatt
gctgaaaagctggtggccggtctggaagctaagggcagcagcatccgctataaagcccga
gtcacccgcattcttaccgaaaagggtcgagcgatcggcgtggaattggcggatggtgaa
aaactctacgcgaagcgaattatctccaacgccacccgctggaatacctttggcgaactg
ctaccgccacaacaagaacccgctcaggaacagcgctggcaacaacgctatcgccagtcg
cccagtttcctcagtcttcatctcggagtcaaagccgatttgctgccagctggcacagaa
tgccaccacatcctgctggaaaattgggatgaattggaagtggaacaaggcacaatcttt
gtctcgattccgaccctgctcgatccctctttagctccgcccgatcgccacattattcac
accttcacgcccagctggttgggtgaatgggataacctcagccccagtgaataccgcgat
cgcaaggcagcagcggccgcaaaactgattcagcgattggaggcgatcttcccgggatta
agcagcgcgatcgactatcaagaagtcggtacgccccgcacccatcgccgctttttgggt
cggcaaaacggcacctatgggccaattccgcgtcgtaaattggcaggcttgctggggatg
cccttcaatcgcaccgcaattcctggtttgtactgcgtcggcgacagcactttccccggt
cagggactaaacgcagtggctttctcaggttacgcctgtggccaccgggtcgccgctgac
ttgggtttggtctaa
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