Synechococcus elongatus PCC7942: Synpcc7942_1357
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Entry
Synpcc7942_1357 CDS
T00300
Name
(GenBank) multi-sensor signal transduction histidine kinase
Organism
syf
Synechococcus elongatus PCC7942
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
PAS
PAS_9
PAS_3
GAF_2
HATPase_c
PAS_8
HisKA
GAF_3
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
ABB57387
UniProt:
Q31NI2
LinkDB
All DBs
Position
complement(1391347..1396770)
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AA seq
1807 aa
AA seq
DB search
MSRIMSIRFLIIEAYLHVLAFALIITGLIGLIGYLDVQHLTFHSLVLPLDSSLLLLLLGG
LLLSAVYRARKLLKALMFLLIITVVYSTTRNWLVGEPETNFSFISEFIRVRTAFVITSLI
SSLAFSWSLESRLTKRRAYFTGVGIILLSSTSLLSDLFWAPEATSLRYDFSSIYVVNFLS
ILLSISVILLAPRSHQSLSSPGRIPVLAGLLGVMLTCITWYLLSLQTISFINQQSDILLA
KVQSSTERALSNRLALIQRMSERWEALGSLPTQAYWQQEAKSYLRDFPNLQWVGVFDSEI
QPYWLVGRTDKAAEWLPRFRAEQNQQVWFQQTLASRSTSLSPVFTLPDNPSTYVLLASPL
NLPNHPPRLIAAGLSLQGIMRDLIGTDYDQFVLALFQGDQPIYRSALLSNQDLKSRPIND
RNIILSNGKSWKLVAYVSNPAAFSTARLLSVLVMAFGLLLSFFLMLSQRLARIATERAKY
LQQANKNLQASLESQAFAQALNQRIMEFTMDVLCSFDREGRFLEVSPSCLKLFGYSPEEL
IGRPYLELVLPEDRDLTIQEAQQLMTGRPTYNFRNRYRHKDGHVIHILWSADWSETDQVL
FAVAHDITPLVQNEAFANRQRDILSLISLDRPLTEILTAICAMVEEFNPSTYCSILRLDR
ETQQIWTVVAPSLPKEYCQAIDGATVGPNTGSCGAAIFRRQPVLVADIESDPLWANDRDT
ALIHGLRSCWSFPLIAHNGQVQGTLAVYQPFPQTPSEDQLQQCLTVAQLAAIAFARSLDR
QQLQDSEQRFRSLFTFNPDAVYSFDLQGIYQSMNSAGFEILDRQADQIIGKHFSDVVISE
DLEKCQQHFDQACKGEAQHYEIRINGRNGQLFYLDVSKFPIVVNNKIVGVFGIAKDITQR
KQITADLQQALMQSNKQTEQLRRLGNAAIATAELQDHQELVKYLVEQVRLTIRAHQAVIS
LTRCDDWSQSINAISLSDKYAAWKNYDELSTGEGIYTLICETNQPLVLTQEELEKHPRWR
GFGDQADKHPPMRGWLAVPLFDPNGRNLGVLQLSDKEEGEFDDDDLAIAQQFAQMTVAVL
ENNRLLNEVLTAEQQLKEQLSFNSTITDCMAEGLLAVDERGKLAFANPTAQEWLAIDKSE
LSQQSLDQLLPLDLTAWNQGGVGNQGELKLKGRILQYEARPLVGPVAERGWVLVLHDVTA
QRQVDQAMRERDQFFSLSLEMFCMVDLRGRFIQVNPAFAATLRYSTAELVGRPYLELVDL
GDRSQIATTIRRLKAGLLIHDLVIRVWDKAGELHWLQISAALGDDRVIYCVARDVTEQRA
IQEQILQQNLLLRMAGQTAKLGGWSVELPSREVIWSPETFSLLGFTDEDEPDLEEALSLY
PPAERALVTKALEDCIQQGISFDFDVAVHNTSGFLLDARVTGQAVRDETGAIVRISGAFQ
DVSDRKRAQREAQRLADRLRTTLESITDGFYTLDENWRFSYLNQEGAQQLGVNVEETLGQ
MVWTAFPGSYESELGHIYRQAIATGEAAHFETYYEPFGRWFEVHAYPSEDGLAVYFRDVS
ERRQTEQNLRITLRELERSNQELQEFAFVASHDLQEPLRKIQAFSDRLIARTSNLDDESQ
DYLRRMASAAGRMQTLIIDLLNYSRVNTRGLPLQPLSLDQVLDDVLVDMEASLDQASAIV
ERQPLPTIQGDAGQFRQVFQNLLSNALKFQSADNQPLIQIYSELTEAGQLRLCIADNGIG
FDEKYLDRIFNPFQRLHSRDAYAGTGIGLAIVKKIIERHGATITAKSIPGQGSVFFITFP
VTEKDFR
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaatcatgagcatacgttttttaattatcgaggcgtatctgcatgtattggcc
tttgcgttaatcatcacaggcctcattgggttaatcggctaccttgatgtccaacactta
acctttcatagtttagttctgccattagatagttcactcttattactattacttggtggg
ctgctacttagcgcagtttatcgcgcaagaaagctgctaaaagccttgatgttcttgttg
ataatcaccgtagtgtacagcaccacaaggaattggttggttggagagccagaaacaaat
ttctcgtttatcagtgaatttattcgggttagaactgcttttgttatcacgtccttgata
agtagtcttgctttttcttggagtctagaatcacgtctaactaagcgacgagcatacttt
actggtgttggtattattttgctttcaagcacatcattgctgtctgacttattttgggct
ccagaagctactagcttgagatatgatttttcgtcaatttatgttgtcaatttcttgagt
attttactgagcattagtgttattttattggcgcctagatcacatcagagtctcagcagc
cccggaagaattcctgttttagcaggcttattgggagtgatgttaacctgcatcacttgg
tatttgctcagcttgcaaactattagctttatcaatcagcaaagtgacattttactggct
aaagtccagagcagcaccgagcgggcattatccaatcgactagcactcattcaacgaatg
agcgagcgctgggaagcgctaggaagcttacccactcaagcctattggcagcaagaagcc
aagagttaccttcgtgacttcccgaatctacagtgggtgggagtattcgattctgagata
cagccctactggctggtgggacgtacagataaggctgcagagtggttgcctcggttcaga
gctgaacagaatcaacaagtttggttccagcaaaccttagcctctaggtctacctcactc
agcccggtattcactcttcctgacaacccaagtacctatgtcttgcttgctagcccgctg
aacttaccgaatcaccccccccgcttaattgctgccggcctcagtcttcagggcattatg
cgtgaccttattgggacagattatgaccagtttgttctggctctatttcaaggcgatcaa
ccaatctaccgctcagctctcctatctaatcaagacttgaagagtaggcctattaacgat
cgcaatattattttgagcaatgggaaaagttggaaattagtggcctatgtcagtaaccca
gccgcattttcaacggcacgtttactatctgtcttggtgatggcatttggcttgttgctg
agcttttttctcatgcttagtcaacgattagcaagaattgctacagaacgtgcaaaatat
ctacaacaagcgaataaaaacttgcaagccagtctggaaagccaagcctttgctcaagcc
ctcaaccagcgcatcatggaattcactatggatgtgctttgttcctttgatcgcgagggg
cgctttctcgaagttagtccatcgtgtcttaagttatttggctatagtccagaagaactg
attggccgcccctatttagaactagtcttgcctgaagatcgggatttaacaattcaggaa
gcccagcagttgatgaccggtcggccaacctataactttcgcaatcgctatcgtcataaa
gatggtcatgttatacacattctttggtctgctgactggtctgaaactgatcaagtgtta
tttgcagttgctcatgatattacgccacttgttcagaacgaagcctttgctaatcgtcaa
cgcgatattttgagcttgatttcccttgatcgccccctgacagaaatattgacggccatt
tgcgcaatggtagaggagttcaatccgagcacttactgctcaattttgcgcctcgatcgg
gagactcaacagatttggacagtcgtagctcccagcctgcccaaagagtattgccaagcg
attgatggcgccacagtggggccaaacacgggaagttgcggggcagctattttccggcgg
caacctgttctcgttgcggacatcgaatcggatccgctttgggcaaacgaccgcgatact
gctctcatccatggcttgcggtcttgctggtcgtttcccttgattgctcataatgggcaa
gttcaagggacattagcagtctatcaaccatttccacagacaccctcggaagatcaactg
cagcagtgtctcaccgtggcacagttagcagcgatcgcgttcgcccgatcactcgaccgc
caacaacttcaagatagtgagcagcgttttcgatccctgtttaccttcaaccctgatgcc
gtctactcatttgacttgcagggtatctaccagagcatgaattctgctggcttcgaaatt
ttggatcgacaagctgatcaaatcatcggtaagcatttttcagatgttgttatctcagaa
gaccttgaaaaatgtcaacagcattttgaccaagcttgcaaaggagaggcgcagcactat
gaaataaggattaacggcagaaacggtcaactcttttacttagatgttagtaaatttccg
attgttgtaaacaacaagattgttggagtttttggtattgccaaagatattactcagaga
aagcaaattactgctgatttacaacaggctttgatgcagagtaataagcagacagagcag
cttcgtcgtttaggaaatgctgcgatcgctactgcagagctccaagaccatcaagaattg
gtcaaatatcttgtggaacaagttcggcttaccattagggctcaccaagccgttattagt
ttaactcgatgtgatgactggagtcagtcaatcaatgctatctctctctctgataaatat
gctgcttggaagaactatgatgaactatccactggcgaaggtatttacaccctcatttgc
gaaacgaatcagcccttggttctaactcaagaagagcttgaaaaacaccctcgctggcga
ggatttggcgaccaagcagataagcatcctcccatgcgaggctggttggctgtacctctg
ttcgatcccaatggccgcaatctcggtgtccttcagctctctgataaagaggaaggcgaa
tttgatgatgatgatctagcgatcgcccagcaatttgcacagatgacagtggcggttttg
gaaaataaccggctcctcaatgaggtgctcactgctgaacaacaactgaaggagcagttg
agcttcaactctacaatcacggactgtatggctgagggactgttggccgttgatgaacgt
ggcaaattagcttttgccaatccaacggcgcaggagtggctggcaatcgacaagtcagaa
ctttcgcaacaatccctcgaccaactcctaccactagatctgactgcttggaatcaagga
ggagttggcaatcaaggggagttgaagcttaaaggacggattttgcagtacgaagcccgt
cccttagtaggccccgtagcagagagaggttgggttttagtcctccacgacgttacagcc
cagcgtcaagttgaccaagccatgcgggagcgagaccagttttttagcctttccctcgag
atgttctgcatggtcgatttacgagggcgtttcattcaggtcaatccagcctttgctgca
acccttcgctacagtaccgctgagctcgttggtcgcccctatctcgagttggtcgatttg
ggcgatcgcagtcagatcgcgactacaattcgccggttgaaagccgggcttctcatccac
gatctagtcatccgcgtctgggacaaagcaggtgagttacactggctacaaatcagtgca
gccctcggggacgatcgcgtcatctattgcgtagcccgcgacgttacagagcaacgagct
attcaagagcaaatccttcagcaaaacctactgctaagaatggctgggcagactgccaag
ctgggcggctggagcgttgagctacccagtcgagaagtgatttggtcgccagaaaccttt
agtttgctgggttttactgatgaagatgaacccgatttggaggaagcccttagcctctat
ccccctgcggagcgagccctagtcacaaaggcgctagaggactgtattcagcagggaatt
agctttgattttgatgtagctgttcacaatacttctggcttcctgctcgatgcacgagtg
acggggcaagccgttcgtgatgaaactggagcgattgtaagaatctcgggggcatttcag
gatgttagcgatcgcaaacgggcccaacgtgaggctcagcgactggcggatcggctacga
accacgcttgaaagcattactgatggcttttataccctcgatgaaaactggcgatttagc
tacctcaatcaggagggtgctcagcagctgggcgtcaatgtagaagaaacgctaggccaa
atggtctggactgcttttcctgggtcctacgagagcgaactcggccatatttatcggcaa
gcgattgctacgggcgaagccgctcattttgagacctactatgaacccttcggccggtgg
tttgaagtccatgcttacccttctgaagacggtttggcagtctacttccgcgatgtttca
gaacgtcggcaaaccgaacaaaatttacggattacgctgcgagagctagagcgcagcaac
caggagctgcaggaatttgcctttgttgcctcccacgaccttcaggagccactgcgcaaa
attcaggctttctcggatcgcctcattgctcggaccagcaacctagatgatgaatctcag
gattatctgaggcgtatggcctctgcagcaggacgaatgcagaccttgatcatcgatttg
ttgaactactcccgtgtcaacactcggggtctgcccttacagcccttatccctcgaccaa
gtactcgacgatgtcttggtcgatatggaagctagtctcgatcaggcctctgcgatcgtg
gagcggcagcccttgccaactatccagggtgacgccggtcagtttcgccaggttttccag
aatctgttgagtaatgccctgaaatttcagtcagcagacaaccaaccattaattcagatt
tacagtgagctgacagaggctgggcaattgaggttgtgcatcgctgataatggcattgga
ttcgatgagaagtatctagaccgaattttcaaccccttccagcgcttacatagtcgcgat
gcctatgctggtacagggattggactagcgatcgtcaaaaaaatcattgagcgccacggc
gcgacgattactgcaaagagtatccccggacaaggtagtgtatttttcattacttttcct
gtaactgaaaaagatttccgatga
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integrated database retrieval system
