Synechococcus elongatus PCC 7942 = FACHB-805: Synpcc7942_1510
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Entry
Synpcc7942_1510 CDS
T00300
Name
(GenBank) group3 RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
syf
Synechococcus elongatus PCC 7942 = FACHB-805
Brite
KEGG Orthology (KO) [BR:
syf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syf03021
]
Synpcc7942_1510
Transcription machinery [BR:
syf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Synpcc7942_1510
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_24
KORA
HTH_Crp_2
Sigma70_ECF
MarR_2
HTH_3
HTH_23
SpoIIID
HTH_17
HTH_50
Trp_repressor
DUF134
SHOCT-like_DUF2089-C
HTH_1
Motif
Other DBs
NCBI-ProteinID:
ABB57540
UniProt:
Q31N29
LinkDB
All DBs
Position
complement(1560399..1561178)
Genome browser
AA seq
259 aa
AA seq
DB search
MGEPLSSDPRRQTFLLLRQYQQTRDHRIRNRLVELNLGLVRQEAYRWVQRCPESFEELVQ
IGSLGLIAAIDRFELERGKAFSSFAVPYIRGEIQHYLRDRSGTVRVPRRWAELHQQIDPL
RHKLQRELGRSPTEEELRQGLGLDAEEWQEVRLIGRNRTTLSLDQPLYADEEQVTSLGDS
IADPKYRSFQLAEEDRIRLQQAMQLLEQRTREILEFVFFYDLTQREVAEKLGLSAVTVSR
QVKKGLKHLKSILRSGDDA
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgaacctctctcctctgacccccgccgacaaacgtttctgttgctacggcagtat
caacagacgcgtgatcatcgaattcggaatcgactcgttgagctgaatttggggttggtg
cgtcaggaagcctaccgctgggtgcaacgctgccccgaaagctttgaggagcttgtgcag
attggatccttggggttaattgcggcgatcgatcgctttgaactggagcggggtaaagca
tttagttcgttcgcagtaccctatatccgcggcgagattcaacactatctgcgcgatcgc
agtggcactgtgcgagtaccccggcgctgggccgaacttcatcagcaaattgaccccctc
cgccataaactccagcgtgaactagggcgatcacccacggaggaagagctgcgccagggc
ttgggcttggatgctgaggaatggcaagaggtgcgtctgattggccgcaatcgcaccact
ctcagcctcgaccagccgttgtacgccgatgaggagcaggtcacaagcctcggcgactcg
atcgcagatccgaaatatcgcagttttcagcttgccgaagaggatcggattcgactccag
caagcaatgcagctgctcgagcagagaactcgtgaaattctcgagtttgtctttttctat
gacctgacccagcgcgaggttgctgaaaaactcggtctgagcgcggtcacagtgtcgcgc
caagtcaaaaaggggctcaagcacctcaaatcgattctgcgcagtggcgatgatgcctag
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